|
species |
Species categories |
Publications |
Journal Title |
IF |
Year |
Techology |
1 |
Leaf armor |
animal |
Comparative transcriptome analysis of chemosensory genes in two sister leaf beetles provides insights into chemosensory speciation |
Insect Biochemistry and Molecular Biology |
3.756 |
2016 |
RNA-Seq |
2 |
human |
human |
cPAS-based sequencing on the BGISEQ-500 to explore small non-coding RNAs |
Clinical Epigenetics |
4.987 |
2016 |
Small RNA |
3 |
human |
human |
Establishment of a normal-derived estrogen receptor-positive cell line comparable to the prevailing human breast cancer subtype |
Oncotarget |
5.168 |
2017 |
RNA-Seq |
4 |
human |
human |
Overexpression of placenta specific 8 is associated with malignant progression and poor prognosis of clear cell renal cell carcinoma |
International Urology and Nephrology |
1.564 |
2017 |
RNA-Seq |
5 |
Rice |
plant |
Overexpression of OsHSP18.0-CI Enhances Resistance to Bacterial Leaf Streak in Rice |
Rice |
3.739 |
2017 |
RNA-Seq |
6 |
Klebsiella |
microorganism |
Coordination of metabolic pathways: Enhanced carbon conservation in 1,3-propanediol production by coupling with optically pure lactate biosynthesis |
Metabolic Engineering |
8.142 |
2017 |
RNA-Seq |
7 |
human |
human |
A reference human genome dataset of the BGISEQ-500 sequencer |
GigaScience |
7.267 |
2017 |
WGS |
8 |
Rhodiola crenulata |
plant |
Draft genome sequence of the Tibetan medicinal herb, Rhodiola crenulata |
GigaScience |
7.267 |
2017 |
RNA-Seq |
9 |
Drosophila |
animal |
Drug induces depression-like phenotypes and alters gene expression profiles in Drosophila |
Brain Research Bulletin |
3.033 |
2017 |
RNA-Seq |
10 |
Dog&wolf |
animal |
Comparative performance of the BGISEQ-500 versus Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing |
GigaScience |
7.267 |
2017 |
WGS |
11 |
human |
human |
Recessive mutation in EXOSC3 associates with mitochondrial dysfunction and pontocerebellar hypoplasia |
Mitochondrion |
3.704 |
2017 |
RNA-Seq |
12 |
oilseed rape |
plant |
Genome-scale mRNA transcriptomic insights into the responses of oilseed rape (Brassica napus L.) to varying boron availabilities |
Plant and Soil |
3.052 |
2017 |
RNA-Seq |
13 |
Mouse |
animal |
Nuclear carbonic anhydrase 6B associates with PRMT5 to epigenetically promote IL-12 expression in innate response |
PNAS |
9.661 |
2017 |
RNA-Seq&ChIP-Seq |
14 |
human |
human |
Methyltransferase SETD2-Mediated Methylation of STAT1 Is Critical for Interferon Antiviral Activity |
Cell |
30.41 |
2017 |
RNA-Seq |
15 |
Arabidopsis thaliana |
plant |
AtACS8 plays a critical role in the early biosynthesis of ethylene elicited by copper ions in Arabidopsis |
Journal of Cell Science |
4.431 |
2017 |
RNA-Seq |
16 |
human |
human |
The FOXN3-NEAT1-SIN3A repressor complex promotes progression of hormonally responsive breast cancer |
The Journal of Clinical Investigation |
12.784 |
2017 |
ChIP-Seq |
17 |
Amphioxus |
animal |
Transcriptome-wide analysis of immune-responsive microRNAs against poly (I:C) challenge in Branchiostoma belcheri by deep sequencing and bioinformatics |
Oncotarget |
5.168 |
2017 |
Small RNA |
18 |
human |
human |
PBRM1 restricts the basal activity of innate immune system through repressing RIG-I-like receptor signaling and is a potential prognostic biomarker for colon cancer |
The Journal of Pathology |
6.894 |
2017 |
RNA-Seq |
19 |
Amphioxus |
animal |
Exploring gene expression changes in the amphioxus gill after poly(I:C) challenge using digital expression profiling |
Fish & Shellfish Immunology |
3.148 |
2017 |
RNA-Seq |
20 |
Sea cucumber |
animal |
Genome-wide analysis of gene expression profile in the respiratory tree of sea cucumber (Apostichopus japonicus) in response to hypoxia conditions |
Journal of the Marine Biological Association of the United Kingdom |
1.038 |
2017 |
RNA-Seq |
21 |
human |
human |
FH535 Inhibits Proliferation and Motility of Colon Cancer Cells by Targeting Wnt/β-catenin Signaling Pathway |
Journal of Cancer |
2.916 |
2017 |
RNA-Seq |
22 |
Mouse |
animal |
Data Descriptor: RNA sequencing analysis of activated macrophages treated with the anti-HIV ABX464 in intestinal inflammation |
Scientific Data |
4.836 |
2017 |
RNA-Seq |
23 |
Mouse |
animal |
Orally Administrated Baker’s Yeast beta-Glucan Promotes Glucose and Lipid Homeostasis in the Livers of ob/ob Mice |
Journal of Agricultural and Food Chemistry |
3.154 |
2017 |
RNA-Seq |
24 |
Bradysia odoriphaga |
animal |
Using Next-Generation Sequencing to Detect Differential Expression Genes in Bradysia odoriphaga after Exposure to Insecticides |
International Journal of Molecular Sciences |
3.226 |
2017 |
RNA-Seq |
25 |
Antler cup coral |
animal |
Systemic response of the stony coral Pocillopora damicornis against acute cadmium stress |
Aquatic Toxicology |
4.129 |
2017 |
RNA-Seq |
26 |
Mouse |
animal |
Characteristics of NK cells from leukemic microenvironment in MLL-AF9 induced acute myeloid leukemia |
Molecular Immunology |
3.236 |
2017 |
RNA-Seq |
27 |
Sea cucumber |
animal |
Differential gene expression in the intestine of sea cucumber (Apostichopus japonicus) under low and high salinity conditions |
Comparative Biochemistry and Physiology D-Genomics & Proteomics |
2.857 |
2017 |
RNA-Seq |
28 |
Human cell line |
human |
Dual inhibition of DNMTs and EZH2 can overcome both intrinsic and acquired resistance of myeloma cells to IMiDs in a cereblon‐independent manner |
Molecular oncology |
5.314 |
2017 |
RNA-seq |
29 |
Human leukemia |
human |
Heterogeneous effects of M-CSF isoforms on the progression of MLL-AF9 leukemia |
Immunology and cell biology |
4.557 |
2017 |
RNA-seq |
30 |
Ramie |
plant |
Gene expression profiling of ramie roots during hydroponic induction and adaption to aquatic environment |
Genomics Data |
2.801 |
2017 |
RNA-Seq |
31 |
human |
human |
Direct inhibition of ACTN4 by ellagic acid limits breast cancer metastasis via regulation of β-catenin stabilization in cancer stem cells |
Journal of Experimental & Clinical Cancer Research |
5.189 |
2017 |
RNA-Seq |
32 |
Penicillium |
microorganism |
Identification of differentially expressed genes involved in spore germination of Penicillium expansum by comparative transcriptome and proteome approaches |
MicrobiologyOpen |
2.747 |
2017 |
RNA-Seq |
33 |
Pancreatic ductal adenocarcinoma |
human |
High expression of diffuse panbronchiolitis critical region 1 gene promotes cell proliferation, migration and invasion in pancreatic ductal adenocarcinoma |
Biochemical and Biophysical Research Communications |
2.466 |
2017 |
RNA-Seq |
34 |
human |
human |
Probing impaired neurogenesis in human brain organoids exposed to alcohol |
Integrative Biology |
3.252 |
2017 |
RNA-Seq |
35 |
human |
human |
Assessment of the cPAS-based BGISEQ-500 platform for metagenomic sequencing |
GigaScience |
7.267 |
2017 |
metagenome |
36 |
Salt grass |
plant |
Transcriptome sequencing and comparative analysis of differentially-expressed isoforms in the roots of Halogeton glomeratus under salt stress |
Gene |
2.415 |
2017 |
RNA-Seq |
37 |
Green carp |
animal |
Transcriptomic analysis reveals transgenerational effect of hypoxia on the neural control of testicular functions |
Aquatic Toxicology |
4.129 |
2017 |
RNA-Seq |
38 |
Mouse |
animal |
Effects of In Utero PFOS Exposure on Transcriptome, Lipidome and Function of Mouse Testis |
Environmental Science & Technology |
6.198 |
2017 |
RNA-Seq |
39 |
human |
human |
Germline and somatic variant identification using BGISEQ-500 and HiSeq X Ten whole genome sequencing |
PLOS ONE |
3.057 |
2018 |
WGS |
40 |
Snail&oyster |
animal |
Conserved and ubiquitous expression of piRNAs and PIWI genes in mollusks antedates the origin of somatic PIWI/piRNA expression to the root of bilaterians |
bioRxiv |
|
2018 |
Small RNA |
41 |
Arabidopsis thaliana |
plant |
Phytochrome A Negatively Regulates the Shade Avoidance Response by Increasing Auxin/Indole Acidic Acid Protein Stability |
Developmental Cell |
9.174 |
2018 |
RNA-Seq |
42 |
watermelon |
plant |
Comparative transcriptome analysis reveals key genes potentially related to soluble sugar and organic acid accumulation in watermelon |
PLOS ONE |
3.057 |
2018 |
RNA-Seq |
43 |
Artemisia annua |
plant |
A novel HD-ZIP IV/MIXTA complex promotes glandular trichome initiation and cuticle development in Artemisia annua |
New Phytologist |
7.33 |
2018 |
RNA-Seq |
44 |
human |
human |
A novel mutation in PRPF31, causative of autosomal dominant retinitis pigmentosa, using the BGISEQ-500 sequencer |
International journal of ophthalmology |
1.1 |
2018 |
WES |
45 |
Rat |
animal |
Preinduction with bone morphogenetic protein-2 enhances cardiomyogenic differentiation of c-kit+ mesenchymal stem cells and repair of infarcted myocardium |
International Journal of Cardiology |
6.189 |
2018 |
RNA-seq |
46 |
Arabidopsis thaliana |
plant |
The GARP/MYB-related grape transcription factor AQUILO improves cold tolerance and promotes the accumulation of raffinose family oligosaccharides |
Journal of Experimental Botany |
5.83 |
2018 |
RNA-seq |
47 |
human |
animal |
An integrated biomanufacturing platform for the large-scale expansion and neuronal differentiation of human pluripotent stem cell-derived neural progenitor cells" |
Acta Biomaterialia |
6.319 |
2018 |
RNA-seq |
48 |
Mouse |
animal |
Cambogin suppresses dextran sulphate sodium‐induced colitis by enhancing Treg cell stability and function |
British journal of pharmacology |
5.49 |
2018 |
RNA-seq |
49 |
Human cell line |
human |
FBXL10 contributes to the development of diffuse large B-cell lymphoma by epigenetically enhancing ERK1/2 signaling pathway |
Cell death & disease |
5.965 |
2018 |
RNA-seq |
50 |
Arabidopsis thaliana |
plant |
Arabidopsis thaliana ACS8 plays a crucial role in the early biosynthesis of ethylene elicited by Cu2+ ions |
JOURNAL OF CELL SCIENCE |
4.431 |
2018 |
RNA-seq |
51 |
Mouse |
animal |
Dual extra-retinal origins of microglia in the model of retinal microglia repopulation |
Cell Discovery |
|
2018 |
RNA-Seq |
52 |
human |
human |
Overcoming erlotinib resistance in EGFR mutation-positive lung adenocarcinomas through repression of phosphoglycerate dehydrogenase |
Theranostics |
8.766 |
2018 |
RNA-Seq |
53 |
Pea |
animal |
A small set of differentially expressed genes was associated with two color morphs in natural populations of the pea aphid Acyrthosiphon pisum |
Gene |
2.415 |
2018 |
RNA-Seq |
54 |
human |
human |
Selenite and methylseleninic acid epigenetically affects distinct gene sets in myeloid leukemia: A genome wide epigenetic analysis |
Free Radical Biology and Medicine |
5.606 |
2018 |
RNA-Seq |
55 |
Mouse |
animal |
Repopulated microglia are solely derived from the proliferation of residual microglia after acute depletion |
Nature Neuroscience |
17.839 |
2018 |
RNA-Seq |
56 |
metagenome |
microorganism |
A novel affordable reagent for room temperature storage and transport of fecal samples for metagenomic analyses |
Microbiome |
8.496 |
2018 |
metagenome |
57 |
tomato |
plant |
Transcriptome resequencing analysis of the responses of Ty5-Mediated resistance to TYLCV via in resistant vs. susceptible tomato cultivars |
PeerJ |
2.17 |
2018 |
RNA-seq |
58 |
metagenome |
microorganism |
Efficacy and safety of faecal microbiota transplantation in patients with psoriatic arthritis: protocol for a 6-month, double-blind, randomised, placebo-controlled trial |
BMJ OPEN |
2.369 |
2018 |
metagenome |
59 |
Human cell line |
human |
Autophagy mediates glucose starvation-induced glioblastoma cell quiescence and chemoresistance through coordinating cell metabolism, cell cycle, and survival |
Cell death & disease |
5.965 |
2018 |
RNA-seq |
60 |
Mouse |
animal |
KRAB-type zinc-finger proteins PITA and PISA specifically regulate p53-dependent glycolysis and mitochondrial respiration |
Cell research |
15.606 |
2018 |
RNA-seq |
61 |
Mouse |
animal |
The LIS1/NDE1 Complex Is Essential for FGF Signaling by Regulating FGF Receptor Intracellular Trafficking |
Cell Reports |
8.282 |
2018 |
RNA-Seq |
62 |
plant |
plant |
A guide to sequence your favorite plant genomes |
Applications in plant sciences |
1.49 |
2018 |
Review |
63 |
Human gastric cancer |
human |
The lncRNA MACC1-AS1 promotes gastric cancer cell metabolic plasticity via AMPK/Lin28 mediated mRNA stability of MACC1 |
Molecular Cancer |
6.204 |
2018 |
RNA-seq |
64 |
Rhizopus |
microorganism |
Comparative genome-wide analysis of extracellular small RNAs from the mucormycosis pathogen Rhizopus delemar |
Scientific Reports |
4.259 |
2018 |
Small RNA |
65 |
Thyroid cancer |
human |
TBX3 promotes proliferation of papillary thyroid carcinoma cells through facilitating PRC2-mediated p57KIP2 repression |
Oncogene |
7.519 |
2018 |
RNA-seq |
66 |
Gastric cancer |
human |
Silkworm Pupa Protein Hydrolysate Induces Mitochondria-Dependent Apoptosis and S Phase Cell Cycle Arrest in Human Gastric Cancer SGC-7901 Cells |
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES |
3.226 |
2018 |
RNA-seq |
67 |
Arabidopsis thaliana |
plant |
Hydrogen peroxide positively regulates brassinosteroid signaling through oxidation of the BRASSINAZOLE-RESISTANT1 transcription factor |
Nature Communications |
12.124 |
2018 |
RNA-seq |
68 |
Human cell line |
human |
Small molecules capable of activating DNA methylation–repressed genes targeted by the p38 mitogen-activated protein kinase pathway |
Journal of Biological Chemistry |
4.125 |
2018 |
RNA-seq |
69 |
Mouse |
animal |
PAF-Myc-Controlled Cell Stemness Is Required for Intestinal Regeneration and Tumorigenesis |
Developmental cell |
9.174 |
2018 |
RNA-seq |
70 |
leukemia |
human |
Leukemia cell-derived microvesicles induce T cell exhaustion via miRNA delivery |
OncoImmunology |
7.719 |
2018 |
RNA-seq |
71 |
Saccharomyces cerevisiae |
microorganism |
RNA-Seq analysis of global transcriptomic changes suggests a roles for the MAPK pathway and carbon metabolism in cell wall maintenance in a Saccharomyces cerevisiae FKS1 mutant |
Biochemical and Biophysical Research Communications |
2.466 |
2018 |
Transcriptome Sequencing |
72 |
kava |
plant |
The biosynthetic origin of psychoactive kavalactones in kava |
bioRxiv |
|
2018 |
Transcriptome Sequencing |
73 |
Listeria |
microorganism |
Identification and Characterization of als Genes Involved in D-Allose Metabolism in Lineage II Strain of Listeria monocytogenes |
Frontiers in Microbiology |
4.076 |
2018 |
RNA-seq |
74 |
Cupriavidus |
microorganism |
In Situ Lignin Bioconversion Promotes Complete Carbohydrate Conversion of Rice Straw by Cupriavidus basilensis B-8 |
ACS Sustainable Chemistry & Engineering |
5.95 |
2018 |
RNA-seq |
75 |
Rat |
animal |
Cranial Irradiation Induces Hypothalamic Injury and Late-Onset Metabolic Disturbances in Juvenile Female Rats |
DEVELOPMENTAL NEUROSCIENCE |
3.03 |
2018 |
RNA-seq |
76 |
human |
human |
Anti?fbrogenic Potential of Mesenchymal Stromal Cells in Treating Fibrosis in Crohn’s Disease |
Digestive Diseases and Sciences |
2.875 |
2018 |
RNA-seq |
77 |
human |
human |
Quality Control of Next-generation Sequencing-based In vitro Diagnostic Test for Onco-relevant Mutations Using Multiplex Reference Materials in Plasma |
Journal of Cancer |
2.916 |
2018 |
Review |
78 |
psoriasis |
human |
An Interleukin-25-Mediated Autoregulatory Circuit in Keratinocytes Plays a Pivotal Role in Psoriatic Skin Inflammation |
Immunity |
22.845 |
2018 |
RNA-seq |
79 |
Human cell line |
human |
Roles of the CSE1L-mediated nuclear import pathway in epigenetic silencing |
PNAS |
9.661 |
2018 |
RNA-seq |
80 |
Wheat rhizosphere |
microorganism |
The Catabolite Repressor/Activator Cra Is a Bridge Connecting Carbon Metabolism and Host Colonization in the Plant Drought Resistance-Promoting Bacterium Pantoea alhagi LTYR-11Z |
Applied and Environmental Microbiology |
3.807 |
2018 |
RNA-seq |
81 |
human |
human |
Efficient and unique co-barcoding of second-generation sequencing reads from long DNA molecules enabling cost effective and accurate sequencing, haplotyping, and de novo assembly |
GENOME RESEARCH |
11.922 |
2019 |
stLFR |
82 |
Corn worm |
animal |
Transcriptome profiling reveals differential gene expression of detoxification enzymes in Sitophilus zeamais responding to terpinen-4-ol fumigation |
Pesticide Biochemistry and Physiology |
2.59 |
2018 |
Transcriptome Sequencing |
83 |
human |
human |
Identification of a mutL?homolog 1 mutation via whole?exome sequencing in a Chinese family with Gardner syndrome |
Molecular Medicine Reports |
1.692 |
2018 |
WES |
84 |
E.coli |
microorganism |
Differential gene expression in Escherichia coli during aerosolization from liquid suspension |
Applied Microbiology and Biotechnology |
3.42 |
2018 |
RNA-seq |
85 |
Rat intestine |
animal |
A gene catalogue of the Sprague-Dawley rat gut metagenome |
GigaScience |
7.267 |
2018 |
metagenome |
86 |
Dracaena cambodiana |
plant |
Complete plastome sequence of Dracaena cambodiana (Asparagaceae): a species considered “Vulnerable” in Southeast Asia |
Mitochondrial DNA Part B |
0.488 |
2018 |
plastome Sequencing |
87 |
Human exosomes |
human |
Variants in EXOSC9 Disrupt the RNA Exosome and Result in Cerebellar Atrophy with Spinal Motor Neuronopathy |
The American Journal of Human Genetics |
9.025 |
2018 |
RNA-seq |
88 |
Oyster |
animal |
The Molecular Mechanism Underlying Pro-apoptotic Role of Hemocytes Specific Transcriptional Factor Lhx9 in Crassostrea hongkongensis |
Frontiers in Physiology |
4.134 |
2018 |
RNA-seq |
89 |
Arabidopsis thaliana |
plant |
Overexpression of VaWRKY14 increases drought tolerance in Arabidopsis by modulating the expression of stress-related genes |
Plant Cell Reports |
2.869 |
2018 |
RNA-seq |
90 |
Salt mustard |
plant |
Compositional and transcriptomic analysis associated with cuticle lipid production on rosette and inflorescence stem leaves in the extremophyte Thellungiella salsuginea |
physiologia plantarum |
3.3 |
2018 |
RNA-seq |
91 |
yeast |
microorganism |
Rapid pathway prototyping and engineering using in vitro and in vivo synthetic genome SCRaMbLE-in methods |
Nature Communications |
12.124 |
2018 |
WGS |
92 |
Mouse |
animal |
Global expression profiling and pathway analysis of mouse mammary tumor reveals strain and stage specific dysregulated pathways in breast cancer progression |
Cell Cycle |
3.53 |
2018 |
RNA-seq |
93 |
human |
human |
STAG2 deficiency induces interferon responses via cGAS-STING pathway and restricts virus infection |
Nature Communications |
12.124 |
2018 |
RNA-seq |
94 |
Rice |
plant |
DDM1 represses noncoding RNA expression and RNA-directed DNA methylation in heterochromatin |
Plant Physiology |
6.456 |
2018 |
Small RNA |
95 |
Rhesus monkey |
animal |
Genetic screening and multipotency in rhesus monkey haploid neural progenitor cells |
Development |
5.843 |
2018 |
RNA-seq |
96 |
Human cleft lip |
human |
A novel PTCH1 mutation underlies non‐syndromic cleft lip and/or palate in a Han Chinese family |
oral diseases |
2.01 |
2018 |
WES |
97 |
Sogatella furcifera |
animal |
Comparative transcriptome analysis of Sogatella furcifera (Horváth) exposed to different insecticides |
Scientific Reports |
4.259 |
2018 |
Transcriptome Sequencing |
98 |
Infective endocarditis |
human |
Identification of pathogens in culture-negative infective endocarditis with metagenomic analysis |
Annals of Clinical Microbiology and Antimicrobials |
3.155 |
2018 |
metagenome |
99 |
human |
human |
Reliable Multiplex Sequencing with Rare Index Mis-Assignment on DNB-Based NGS Platform |
BMC Genomics |
3.73 |
2018 |
WGS&PCR-Free |
100 |
Human cell line |
human |
Bioengineered Noncoding RNAs Selectively Change Cellular miRNome Profiles for Cancer Therapy |
Journal of Pharmacology and Experimental Therapeutics |
3.867 |
2018 |
RNA-seq&Small RNA |
101 |
Cynoglossus semilaevis |
animal |
Transcriptome profiling of immune-responsive genes in the intestine of Cynoglossus semilaevis Günther challenged with Shewanella algae |
Fish & Shellfish Immunology |
3.148 |
2018 |
RNA-seq |
102 |
tomato |
plant |
Expression of grape ACS1 in tomato decreases ethylene and alters the balance between auxin and ethylene during shoot and root formation |
Journal of Plant Physiology |
3.121 |
2018 |
RNA-seq |
103 |
Ovarian cancer |
human |
C/EBPβ enhances platinum resistance of ovarian cancer cells by reprogramming H3K79 methylation |
Nature Communications |
12.124 |
2018 |
WES |
104 |
Mycobacterium |
microorganism |
Diagnosis of local hepatic tuberculosis through next-generation sequencing: Smarter, faster and better |
Clinics and Research in Hepatology and Gastroenterology |
2.623 |
2018 |
Pathogen detection |
105 |
cucumber |
plant |
Differential Gene Expression Caused by the F and M Loci Provides Insight Into Ethylene-Mediated Female Flower Differentiation in Cucumber |
Front. Plant Sci. |
3.678 |
2018 |
RNA-seq |
106 |
Spontaneous preterm birth |
human |
Whole exome sequencing reveals HSPA1L as a genetic risk factor for spontaneous preterm birth |
PLOS.Genetics |
5.54 |
2018 |
WES |
107 |
human |
human |
The epigenetic modifier PBRM1 restricts the basal activity of the innate immune system by repressing retinoic acid-inducible gene-I-like receptor signalling and is a potential prognostic biomarker for colon cancer. |
J Pathol |
6.253 |
2018 |
RNA-seq |
108 |
Human cell line |
human |
Mutually exclusive acetylation and ubiquitylation of the splicing factor SRSF5 control tumor growth |
Nature Communications |
12.124 |
2018 |
RNA-Seq |
109 |
Human interstitial cells |
human |
Differential and Interactive Effects of Substrate Topography and Chemistry on Human Mesenchymal Stem Cell Gene Expression |
International Journal of Molecular Sciences. |
3.687 |
2018 |
RNA-Seq |
110 |
Arabidopsis thaliana |
plant |
Comparative performance of the BGISEQ-500 and Illumina HiSeq4000 sequencing platforms for transcriptome analysis in plants |
Plant Methods |
4.269 |
2018 |
RNA-seq |
111 |
Rice |
plant |
Modulating plant growth–metabolism coordination for sustainable agriculture |
Nature |
41.577 |
2018 |
RNA-Seq&ChIP-Seq |
112 |
Mouse |
animal |
Menin Deficiency Leads to Depressive-like Behaviors in Mice by Modulating Astrocyte-Mediated Neuroinflammation |
Neuron |
14.318 |
2018 |
RNA-Seq |
113 |
human |
human |
3 Branch ligation: a novel method to ligate non-complementary DNA to recessed or internal 30OH ends in DNA or RNA |
DNA RES |
5.404 |
2018 |
stLFR |
114 |
human |
human |
Validation of combinatorial probe–anchor ligation-based sequencing as non-invasive prenatal test for trisomy at a central laboratory |
Ultrasound in Obstetrics & Gynecology |
4.71 |
2017 |
NIFTY |
115 |
plant |
plant |
10KP: A Phylodiverse Genome Sequencing Plan |
GigaScience |
7.267 |
2018 |
COMMENTARY |
116 |
fish |
animal |
Chromosome-level reference genome of the Siamese fighting fish Betta splendens, a model species for the study of aggression |
GigaScience |
7.267 |
2018 |
Hi-C library |
117 |
tomato |
plant |
Comparative Transcriptome Profiling of Two Tomato Genotypes in Response to Potassium-Deficiency Stress |
International Journal of Molecular Sciences |
3.687 |
2018 |
RNA-Seq |
118 |
human |
human |
The microRNA-29/PGC1α regulatory axis is critical for metabolic control of cardiac function |
PLOS ONE |
3.057 |
2018 |
Small RNA |
119 |
human |
human |
The metagenome of the female upper reproductive tract |
GigaScience |
7.267 |
2018 |
metagenome |
120 |
virus |
human |
clinical application of respiratory virus detection by metagenomic next generation sequencing |
Chinese Journal of Nosocomiology(china) |
|
2018 |
metagenome |
121 |
Alfalfa |
plant |
Multiple Regulatory Networks Are Activated during Cold Stress in Medicago sativa L |
International Journal of Molecular Sciences |
3.687 |
2018 |
RNA-Seq |
122 |
Rat |
animal |
Hippocampal gene expression profiling in a rat model of functional constipation reveals abnormal expression genes associated with cognitive function |
Neuroscience Letters |
2.18 |
2018 |
RNA-Seq |
123 |
human |
human |
Advanced Whole-Genome Sequencing and Analysis of Fetal Genomes from Amniotic Fluid |
Clinical Chemistry |
8.636 |
2018 |
PGS |
124 |
human |
human |
Isolation and whole genome sequencing of fetal cells from maternal blood towards the ultimate non‐invasive prenatal testing |
PRENATAL DIAGNOSIS |
2.523 |
2017 |
PGS |
125 |
human |
human |
Multiplex Cell-Free DNA Reference Materials for Quality Control of Next-Generation Sequencing-Based In Vitro Diagnostic Tests of Colorectal Cancer Tolerance |
Journal of Cancer |
2.916 |
2018 |
cfDNA |
126 |
Mouse |
animal |
Glucocorticoid receptor in stromal cells is essential for glucocorticoid-mediated suppression of inflammation in arthritis |
Annals of the Rheumatic Diseases |
12.38 |
2018 |
RNA-Seq |
127 |
Human cell line |
human |
The epigenetic modifer PBRM1 restricts the basal activity of the innate immune system by repressing retinoic acid-inducible gene-I-like receptor signalling and is a potential prognostic biomarker for colon cancer |
Journal of Pathology |
6.253 |
2018 |
RNA-Seq |
128 |
Mouse |
animal |
Polysaccharides extracted from Phellinus linteus ameliorate high-fat high-fructose diet induced insulin resistance in mice |
Carbohydrate Polymers |
5.158 |
2018 |
RNA-Seq |
129 |
Zebrafish |
animal |
Transcriptome analysis reveals functional roles of nacreous protein N16 in prednisolone-induced osteoporotic zebrafish |
International Journal of Biological Macromolecules |
3.909 |
2018 |
RNA-Seq |
130 |
peanut |
plant |
Comparative transcriptome analysis revealed key factors for differential cadmium transport and retention in roots of two contrasting peanut cultivars |
BMC genomics |
3.73 |
2018 |
RNA-Seq |
131 |
Alfalfa |
plant |
Comparative Transcriptomic and Physiological Analyses of Medicago sativa L. Indicates that Multiple Regulatory Networks Are Activated during Continuous ABA Treatment |
Int J Mol Sci. |
3.687 |
2018 |
RNA-Seq |
132 |
Oyster |
animal |
Analysis of in situ Transcriptomes Reveals Divergent Adaptive Response to Hyper- and Hypo-Salinity in the Hong Kong Oyster, Crassostrea hongkongensis |
Front. Physiol |
3.394 |
2018 |
RNA-Seq |
133 |
Heortia vitessoides |
animal |
Candidate olfactory genes identified in Heortia vitessoides(Lepidoptera: Crambidae) by antennal transcriptome analysis |
Comparative Biochemistry and Physiology Part D: Genomics and Proteomics |
2.913 |
2018 |
Transcriptome Sequencing |
134 |
barley |
plant |
Transcriptomic comparison of two barley genotypes differing in arsenic tolerance exposed to arsenate and phosphate treatments |
Plant Physiology and Biochemistry |
2.718 |
2018 |
RNA-Seq |
135 |
alveolar macrophages |
animal |
Transcriptome of porcine alveolar macrophages activated by interferon-gamma and lipopolysaccharide |
Biochemical and Biophysical Research Communications |
2.559 |
2018 |
RNA-Seq |
136 |
Salt grass |
plant |
Comparative transcriptome analysis of genes involved in Na+ transport in the leaves of halophyte Halogeton glomeratus |
Gene |
2.498 |
2018 |
RNA-seq |
137 |
duck |
animal |
RNA-Seq analysis of duck embryo fibroblast cell gene expression during the early stage of egg drop syndrome virus infection |
Poultry Science |
2.216 |
2018 |
RNA-Seq |
138 |
Heortia vitessoides |
animal |
De novo assembly and identification of antennal transcriptome reveals an olfactory system in Heortia vitessoides (Lepidoptera: Crambidae) |
PeerJ |
2.17 |
2017 |
Transcriptome Sequencing |
139 |
Jujube |
plant |
Combination of iTRAQ proteomics and RNA-seq transcriptomics reveals jasmonate-related-metabolisms central regulation during the process of Jujube witches’ broom recovery by tetracycline treatment |
Scientia Horticulturae |
1.76 |
2018 |
RNA-seq |
140 |
human |
human |
The application of NIPT using combinatorial probe-anchor synthesis to identify sex chromosomal aneuploidies (SCAs) in a cohort of 570 pregnancies. |
Mol Cytogenet. |
1.167 |
2018 |
NIFTY |
141 |
Cell line |
human |
A new massively parallel nanoball sequencing platform for whole exome research |
BMC Bioinformatics |
2.448 |
2019 |
WES |
142 |
Mouse embryo Stem cells&human K562 cells |
animal |
Comparative analysis of sequencing technologies platforms for single-cell transcriptomics |
GENOME BIOLOGY |
13.214 |
2019 |
scRNA-Seq |
143 |
Purple cabbage, kale |
plant |
Maintenance of grafting-induced epigenetic variations in the asexual progeny of Brassica oleracea and B juncea chimera |
Plant J |
5.97 |
2018 |
Small RNA |
144 |
Exosomes |
human |
Exosomes derived from preadipocytes improve osteogenic differentiation, potentially via reduced miR?223 expression |
Molecular Medicine Reports |
1.692 |
2018 |
RNA-Seq |
145 |
Caenorhabditis elegans |
animal |
A Persistence Detector for Metabolic Network Rewiring in an Animal |
CELL REP |
8.282 |
2019 |
RNA-Seq |
146 |
human |
human |
An integrated chromatin accessibility and transcriptome landscape of human pre-implantation embryos |
Nature Communications |
12.124 |
2019 |
ATAC-seq&LiCAT-seq |
147 |
Gram-positive bacteria |
microorganism |
Functional analysis of Leifsonia xyli subsp xyli membrane protein gene Lxx18460 (anti-sigma K) |
BMC Microbiol |
2.644 |
2019 |
RNA-Seq |
148 |
Celastrus angulatus maxim |
plant |
De novo leaf and root transcriptome analysis to explore biosynthetic pathway of Celangulin V in Celastrus angulatus maxim |
BMC GENOMICS |
3.729 |
2019 |
RNA-Seq |
149 |
human |
human |
Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity |
Nature Communications |
12.124 |
2019 |
scCAT-seq |
150 |
Nematode |
microorganism |
The nuclear hormone receptor NHR-86 controls anti-pathogen responses in C. elegans |
PLOS GENET |
6.1 |
2019 |
RNA-Seq&ChIP-seq |
151 |
Mouse |
animal |
Organic cation transporter 3 (Oct3) is a distinct catecholamines clearance route in adipocytes mediating the beiging of white adipose tissue |
PLOS BIOL |
9.797 |
2019 |
RNA-Seq |
152 |
Rice |
plant |
The basic helix‐loop‐helix transcription factor, OsPIL15, regulates grain size via directly targeting a purine permease gene OsPUP7 in rice |
PLANT BIOTECHNOL J |
7.443 |
2019 |
RNA-Seq |
153 |
Brassica |
plant |
Chromosome level comparative analysis of Brassica genomes |
PLANT MOL BIOL |
3.356 |
2019 |
Hi-C library |
154 |
human |
human |
CINP is a novel cofactor of KLF5 required for its role in the promotion of cell proliferation, survival and tumor growth |
INT J CANCER |
6.513 |
2019 |
RNA-Seq |
155 |
human |
human |
Knockdown of KDM2A inhibits proliferation associated with TGF-β expression in HEK293T cell |
MOL CELL BIOL |
4.398 |
2019 |
RNA-Seq |
156 |
human |
human |
Toxoplasma gondii ROP17 inhibits the innate immune response of HEK293T cells to promote its survival |
PARASITOL RES |
2.329 |
2019 |
RNA-Seq |
157 |
tomato |
plant |
Overexpression of the KNOX gene Tkn4 affects pollen development and confers sensitivity to gibberellin and auxin in tomato |
J PLANT BIOL |
1.437 |
2019 |
RNA-Seq |
158 |
tomato |
plant |
A tomato B‐box protein SlBBX20 modulates carotenoid biosynthesis by directly activating PHYTOENE SYNTHASE 1, and is targeted for 26S proteasome‐mediated degradation |
New Phytologist |
7.33 |
2019 |
RNA-Seq |
159 |
human |
human |
Frequency of mutations in 21 hereditary breast and ovarian cancer susceptibility genes among high-risk Chinese individuals |
bioRxiv |
|
2019 |
capture |
160 |
Rice |
plant |
Expression of Maize MADS Transcription Factor ZmES22 Negatively Modulates Starch Accumulation in Rice Endosperm |
INT J MOL SCI |
3.226 |
2019 |
RNA-Seq |
161 |
human |
human |
MicroRNA profiling from dried blood samples |
Critical Reviews in Clinical Laboratory Sciences |
6.481 |
2019 |
Small RNA |
162 |
Arabidopsis thaliana |
plant |
Functional analysis for domains of maize PPR protein EMP5 in RNA editing and plant development in Arabidopsis |
PLANT GROWTH REGUL |
2.646 |
2019 |
RNA-Seq |
163 |
human |
human |
Human epidermal growth factor receptor 2 amplification as a biomarker for treatment in patients with lymph node?metastatic penoscrotal extramammary Paget's disease |
Oncology Letters |
1.664 |
2019 |
WGS |
164 |
Grouper |
animal |
A chromosome-level genome of black rockfish, Sebastes schlegelii, provides insights into the evolution of live birth |
Molecular Ecology Resources |
7.059 |
2019 |
RNA-Seq&ATAC-seq |
165 |
Amphioxus |
animal |
Genome-wide transcriptional response of microRNAs to the benzo(a)pyrene stresD168:D178s in amphioxus Branchiostoma belcheri |
CHEMOSPHERE |
4.208 |
2019 |
Small RNA |
166 |
Zebrafish |
animal |
Microcystin-LR exposure induced nephrotoxicity by triggering apoptosis in female zebrafish |
CHEMOSPHERE |
4.208 |
2019 |
RNA-Seq |
167 |
human |
human |
Genomic sequencing and editing revealed the GRM8 signaling pathway as potential therapeutic targets of squamous cell lung cancer |
CANCER LETT |
6.375 |
2019 |
WGS&WES |
168 |
human |
human |
Nonobese subjects of Bacteroides and Prevotella enterotypes responded differentially to calorie restriction intervention |
bioRxiv |
|
2019 |
metagenome |
169 |
Alfalfa |
plant |
Full-length transcript sequencing and comparative transcriptomic analysis to evaluate the contribution of osmotic and ionic stress components towards salinity tolerance in the roots of cultivated alfalfa (Medicago sativa L) |
BMC Plant Biology |
3.964 |
2019 |
RNA-Seq |
170 |
human |
human |
Genome-wide identification of protein binding sites on RNAs in mammalian cells |
Biochemical and Biophysical Research Communications |
2.466 |
2019 |
RPBS-Cap |
171 |
Amphioxus |
animal |
Genome-wide gene expression analysis reveals novel insights into the response to nitrite stress in gills of Branchiostoma belcheri |
CHEMOSPHERE |
4.208 |
2019 |
RNA-Seq |
172 |
Mouse |
animal |
Loss or oncogenic mutation of DROSHA impairs kidney development and function, but is not sufficient for Wilms tumor formation |
INT J CANCER |
6.513 |
2018 |
RNA-Seq |
173 |
Pathogen |
microorganism |
Pathogens in Patients with Granulomatous lobular mastitis |
INT J INFECT DIS |
2.532 |
2019 |
Pathogen detection |
174 |
human |
human |
The identification of a transthyretin variant p.D38G in a Chinese family with early-onset leptomeningeal amyloidosis |
Journal of Neurology |
3.783 |
2019 |
WES |
175 |
bacterial |
microorganism |
MALDI-TOF Characterization of Protein Expression Mutation During Morphological Changes of Bacteria Under the Impact of Antibiotics |
ANAL CHEM |
6.32 |
2019 |
RNA-Seq |
176 |
Herpes Simplex Viruses |
microorganism |
Identification of Putative UL54 (ICP27) Transcription Regulatory Sequences Binding to Oct-1, v-Myb, Pax-6 and Hairy in Herpes Simplex Viruses |
Journal of Cancer |
2.916 |
2019 |
Pathogen detection |
177 |
Tropical fruit of Indonesia |
plant |
Datasets for genome assembly of six underutilized Indonesian fruits |
Data in Brief |
|
2019 |
WGS |
178 |
Brassica |
plant |
The complete plastid genomes of four species from Brassicales |
MITOCHONDR DNA part B |
0.488 |
2019 |
plastome Sequencing |
179 |
insect |
animal |
Candidate olfactory genes identified in Heortia vitessoides (Lepidoptera: Crambidae) by antennal transcriptome analysis |
Comparative Biochemistry and Physiology Part D: Genomics and Proteomics |
2.857 |
2019 |
RNA-seq |
180 |
virus |
microorganism |
Genome comparison of African swine fever virus China/2018/AnhuiXCGQ strain and related European p72 Genotype II strains |
TRANSBOUND EMERG DIS |
3.585 |
2019 |
Pathogen detection |
181 |
Sea worm family |
animal |
Complete mitogenome of a Baltic Sea specimen of the non-indigenous polychaete Marenzelleria neglecta |
MITOCHONDR DNA part B |
0.488 |
2019 |
WGS |
182 |
metagenome |
microorganism |
Metagenomic next-generation sequencing contribution in identifying prosthetic joint infection due to Parvimonas micra: a case report |
journal of Bone and Joint Infection |
|
2019 |
Pathogen detection |
183 |
White whale |
animal |
The first chromosome‐level genome for a marine mammal as a resource to study ecology and evolution |
Molecular Ecology Resources |
7.332 |
2019 |
WGS |
184 |
metagenome |
microorganism |
The vagino-cervical microbiome as a woman's life history |
bioRxiv |
|
2019 |
metagenome |
185 |
Danionella translucida |
animal |
Hybrid genome assembly and annotation of Danionella translucida |
bioRxiv |
|
2019 |
Transcriptome Sequencing |
186 |
corn |
plant |
Molecular Mechanisms Underlying Increase in Lysine Content of Waxy Maize through the Introgression of the opaque2 Allele |
INT J MOL SCI |
3.226 |
2019 |
RNA-Seq |
187 |
penguin |
animal |
Mitogenomes uncover extinct penguin taxa and reveal island formation as a key driver of speciation |
Molecular Biology and Evolution |
6.202 |
2019 |
WGS |
188 |
metagenome |
microorganism |
The biodiversity Composition of Microbiome in Ovarian Carcinoma Patients |
Scientific Reports |
4.259 |
2019 |
RNA-Seq |
189 |
apple |
plant |
Methylome and transcriptome analyses of apple fruit somatic mutations reveal the difference of red phenotype |
BMC genomics |
3.73 |
2019 |
RNA-Seq |
190 |
tomato |
plant |
SlMYB75, an MYB-type transcription factor,promotes anthocyanin accumulation and enhances volatile aroma production in tomato fruits |
Horticulture Research |
3.6 |
2019 |
RNA-Seq |
191 |
Mouse |
animal |
The effects of perfluorooctanoate on high fat diet induced non-alcoholic fatty liver disease in mice |
Toxicology |
3.582 |
2019 |
RNA-Seq |
192 |
|
plant |
Molecular digitization of a botanical garden: high-depth whole genome sequencing of 689 vascular plant species from the Ruili Botanical Garden |
GigaScience |
7.267 |
2019 |
WGS |
193 |
American ginseng |
plant |
Characterization of the complete chloroplast genome of American ginseng, Panax quinquefolius L. |
Mitochondrial DNA Part B |
0.488 |
2019 |
chloroplast Sequencing |
194 |
Nanmu |
plant |
Characterization of the complete chloroplast genome of the Phoebe zhennan S. Lee |
Mitochondrial DNA Part B |
0.488 |
2019 |
chloroplast Sequencing |
195 |
eggplant |
plant |
Comparative transcriptome analysis reveals K+ transporter gene contributing to salt tolerance in eggplant |
BMC Plant Biology |
3.964 |
2019 |
RNA-Seq |
196 |
Mouse |
animal |
Eradication of glioblastoma by immuno-virotherapy with a retargeted oncolytic HSV in a preclinical model |
Oncogene |
7.519 |
2019 |
RNA-Seq |
197 |
Bradysia odoriphaga |
animal |
Genome-wide analysis of developmental stage-specific transcriptome in Bradysia odoriphaga |
Comparative Biochemistry and Physiology D-Genomics & Proteomics |
2.857 |
2019 |
RNA-Seq |
198 |
human |
human |
A Novel Heterozygous Mutation of the COL4A3 Gene Causes a Peculiar Phenotype without Hematuria and Renal Function Impairment in a Chinese Family |
DISEASE MARKERS |
2.348 |
2019 |
WES |
199 |
human |
human |
Comparative performance of the BGI and Illumina sequencing technology for single-cell RNA sequencing |
bioRxiv |
|
2019 |
scRNA-Seq |
200 |
Rat |
animal |
Anti-senescence role of heterozygous fumarate hydratase gene knockout in rat lung fibroblasts in vitro |
Aging |
5.179 |
2019 |
RNA-Seq |
201 |
Lactobacillus |
microorganism |
Two Strains of Lactobacilli Effectively Decrease the Colonization of VRE in a Mouse Model |
Frontiers in cellular and Infection Microbiology |
3.52 |
2019 |
RNA-Seq |
202 |
dog |
animal |
Ancient RNA from Late Pleistocene permafrost and historical canids shows tissue-specific transcriptome survival |
bioRxiv |
|
2019 |
RNA-Seq |
203 |
human |
human |
Diminished OPA1 expression and impaired mitochondrial morphology and homeostasis in Aprataxin-deficient cells |
Nucleic Acids Research |
10.162 |
2019 |
RNA-Seq |
204 |
human |
human |
Specific Decrease in B-Cell-Derived Extracellular Vesicles Enhances Post-Chemotherapeutic CD8+ T Cell Responses |
Immunity |
22.845 |
2019 |
RNA-Seq |
205 |
Mouse |
animal |
Ex Vivo Hepatocyte Reprograming Promotes Homology‐Directed DNA Repair to Correct Metabolic Disease in Mice After Transplantation |
hepatology communications |
|
2019 |
RNA-Seq |
206 |
Rodents |
animal |
Hepatic IRF6 alleviates liver steatosis and metabolic disorder by transcriptionally suppressing PPARγ |
hepatology |
13.246 |
2019 |
RNA-Seq&ChIP-Seq |
207 |
Neisseria gonorrhoeae |
microorganism |
Identification and expression analysis of ceftriaxone resistance-related genes in Neisseria gonorrhoeae integrating RNA-Seq data and qRT-PCR validation |
Journal of Global Antimicrobial Resistance |
1.276 |
2019 |
RNA-Seq |
208 |
human |
human |
Identification of a Heterozygous Mutation in the TGFBI Gene in a Hui-Chinese Family with Corneal Dystrophy |
Journal of Ophthalmology |
1.712 |
2019 |
RNA-Seq |
209 |
Rice |
plant |
OsHLH61-OsbHLH96 influences rice defense to brown planthopper through regulating the pathogen-related genes |
rice |
3.739 |
2019 |
RNA-Seq |
210 |
Arabidopsis thaliana |
plant |
The R2R3-MYB transcription factor MYB49 regulates cadmium accumulation |
Plant physiology |
6.456 |
2019 |
RNA-Seq |
211 |
oilseed rape |
plant |
Transcriptome analysis of the irregular shape of shoot apical meristem in dt (dou tou) mutant of Brassica napus L. |
Molecular Breeding |
2.465 |
2019 |
RNA-Seq |
212 |
potato |
plant |
Sequencing and characterization the complete chloroplast genome of the potato, Solanum tuberosum L. |
MITOCHONDR DNA part B |
0.488 |
2019 |
chloroplast Sequencing |
213 |
human |
human |
Precisely controlling endogenous protein dosage in hPSCs and derivatives to model FOXG1 syndrome |
Nature Communications |
12.124 |
2019 |
RNA-Seq |
214 |
Mouse |
animal |
Transcriptome Profile in Hippocampus During Acute Inflammatory Response to Surgery: Toward Early Stage of PND |
Frontiers in Immunology |
6.429 |
2019 |
RNA-Seq |
215 |
Dandelion |
plant |
Dandelion polysaccharides exert anticancer effect on Hepatocellular carcinoma by inhibiting PI3K/AKT/mTOR pathway and enhancing immune response |
Journal of Functional Foods |
3.144 |
2019 |
RNA-Seq |
216 |
peach |
plant |
A single nucleotide mutation in GID1c disrupts its interaction with DELLA1 and causes a GA‐insensitive dwarf phenotype in peach |
PLANT BIOTECHNOLOGY JOURNAL |
7.443 |
2019 |
RNA-Seq |
217 |
Nude mouse |
animal |
RREB1-induced upregulation of the lncRNA AGAP2-AS1 regulates the proliferation and migration of pancreatic cancer partly through suppressing ANKRD1 and ANGPTL4 |
Cell Death & Disease |
5.965 |
2019 |
RNA-Seq |
218 |
human |
human |
CCR7 Chemokine Receptor-Inducible lnc-Dpf3 Restrains Dendritic Cell Migration by Inhibiting HIF-1α-Mediated Glycolysis |
Immunity |
22.845 |
2019 |
RNA-Seq |
219 |
Mouse |
animal |
Intestinal transcriptional profling reveals fava bean-induced immune response in DBA/1 mice |
Biological Research |
1.692 |
2019 |
RNA-Seq |
220 |
Anabas testudineus |
animal |
Transcriptomic analysis of Anabas testudineus and its defensive mechanisms in response to persistent organic pollutants exposure |
SCIENCE OF THE TOTAL ENVIRONMENT |
4.9 |
2019 |
RNA-Seq |
221 |
Yak |
animal |
Nutritional Interventions Improved Rumen Functions and Promoted Compensatory Growth of Growth-Retarded Yaks as Revealed by Integrated Transcripts and Microbiome Analyses |
Frontiers in microbiology |
4.076 |
2019 |
RNA-Seq |
222 |
human |
human |
The proinflammatory cytokine TNF-α induces DNA demethylation–dependent and –independent activation of interleukin-32 expression |
Journal of Biological Chemistry |
4.125 |
2019 |
RNA-Seq |
223 |
Diatom |
plant |
Complete chloroplast genome of the diatom Skeletonema pseudocostatum from the Western Mediterranean coast of Algeria |
MITOCHONDR DNA part B |
0.488 |
2019 |
chloroplast Sequencing |
224 |
human |
human |
COL1A2 p.Gly1066Val variant identified in a Han Chinese family with osteogenesis imperfecta type I |
molecular genetics&genomics |
2.979 |
2019 |
WES |
225 |
human |
human |
Establishment of a human embryonic stem cell-based liver differentiation model for hepatotoxicity evaluations |
Ecotoxicology and Environmental Safety |
3.743 |
2019 |
RNA-Seq |
226 |
mouse |
animal |
Germline deletion of Cdyl causes teratozoospermia and progressive infertility in male mice |
Cell Death & Disease |
5.965 |
2019 |
RNA-seq |
227 |
human |
human |
Novel GLI3 mutations in Chinese patients with non-syndromic post-axial polydactyly |
CURRENT MOLECULAR MEDICINE |
2.345 |
2019 |
WES |
228 |
Horseshoe |
plant |
RNA-Seq analysis of gene expression during the yellowing developmental process of fresh-cut Chinese water chestnuts |
Scientia Horticulturae |
1.624 |
2019 |
RNA-seq |
229 |
fish |
animal |
Hypoxia causes transgenerational impairment of ovarian development and hatching success in fish |
ENVIRONMENTAL SCIENCE & TECHNOLOGY |
6.198 |
2019 |
RNA-seq |
230 |
human |
human |
Integrated lipidomics and transcriptomics characterization upon aging related changes of lipid species and pathways in human bone marrow mesenchymal stem cells |
JOURNAL OF PROTEOME RESEARCH |
4.268 |
2019 |
RNA-seq |
231 |
mouse |
animal |
Toxicity Induced by Zirconia Oxide Nanoparticles on Various Organs After Intravenous Administration in Rats |
Journal of Biomedical Nanotechnology |
4.521 |
2019 |
RNA-seq |
232 |
human |
human |
Comparative analysis of novel MGISEQ-2000 sequencing platform vs Illumina HiSeq 2500 for whole-genome sequencing |
bioRxiv |
|
2019 |
WGS |
233 |
human |
human |
Nucleoporin Seh1 Interacts with Olig2/Brd7 to Promote Oligodendrocyte Differentiation and Myelination |
Neuron |
14.318 |
2019 |
RNA-seq |
234 |
human |
human |
Generation of Highly Biomimetic Quality Control Materials for Noninvasive Prenatal Testing Based on Enzymatic Digestion of Matched Mother–Child Cell Lines |
CLINICAL CHEMISTRY |
8.008 |
2019 |
NIFTY |
235 |
Salvia |
plant |
Comparative transcriptomic analysis provides insights into the development of a Salvia splendens Ker-Gawler mutant, SX919M |
PLoS One |
2.806 |
2019 |
RNA-seq |
236 |
mouse |
animal |
Absence of GdX/UBL4A Protects against Inflammatory Diseases by Regulating NF-кB Signaling in Macrophages and Dendritic Cells |
Theranostics |
8.712 |
2019 |
RNA-seq |
237 |
mouse |
animal |
Hypoxic BMSC-derived exosomal miRNAs promote metastasis of lung cancer cells via STAT3-induced EMT |
Molecular Cancer |
6.204 |
2019 |
RNA-seq |
238 |
Microalgae |
plant |
Transcriptomic and lipidomic analysis of an EPA-containing Nannochloropsis sp. PJ12 in response to nitrogen deprivation |
Scientific Reports |
4.259 |
2019 |
RNA-seq |
239 |
human |
human |
Collaborative ISL1/GATA3 interaction in controlling neuroblastoma oncogenic pathways overlapping with but distinct from MYCN |
Theranostics |
8.712 |
2019 |
RNA-seq |
240 |
Arabidopsis thaliana |
plant |
Comparative physiological and transcriptomic analyses reveal the toxic effects of ZnO nanoparticles on plant growth |
ENVIRONMENTAL SCIENCE & TECHNOLOGY |
6.198 |
2019 |
RNA-seq |
241 |
Spider Mite |
animal |
Identification of Saliva Proteins of the Spider Mite Tetranychus evansi by Transcriptome and LC–MS/MS Analyses |
PROTEOMICS |
4.041 |
2018 |
RNA-seq |
242 |
Mosquito |
animal |
Mosquito Small RNA Responses to West Nile and Insect-Specific Virus Infections in Aedes and Culex Mosquito Cells |
viruses |
3.761 |
2019 |
Small RNA |
243 |
Rose yellow mosaic virus |
microorganism |
Complete genome sequence of a novel member of the family Potyviridae isolated from Phellodendron amurense Rupr. in Liaoning, China |
ARCHIVES OF VIROLOGY |
2.058 |
2019 |
Small RNA |
244 |
mouse |
animal |
An ATAC-seq atlas of chromatin accessibility in mouse tissues |
Scientific Data |
5.305 |
2019 |
ATAC-seq |
245 |
metagenome |
microorganism |
Life history recorded in the vagino-cervical microbiome |
bioRxiv |
|
2019 |
metagenome |
246 |
human |
human |
MicroRNA signature of air pollution exposure‐induced congenital defects |
JOURNAL OF CELLULAR PHYSIOLOGY |
4.08 |
2019 |
Small RNA |
247 |
human |
human |
Decitabine shows synergistic effects with arsenic trioxide against myelodysplastic syndrome cells via endoplasmic reticulum stress-related apoptosis |
Journal of Investigative Medicine |
1.943 |
2019 |
RNA-seq |
248 |
human |
human |
Panel-based NGS reveals disease-causing mutations in hearing loss patients using BGISEQ-500 platform |
MEDICINE |
1.803 |
2019 |
capture |
249 |
human |
human |
Super-enhancers: novel target for pancreatic ductal adenocarcinoma |
oncotarget |
5.168 |
2019 |
RNA-Seq&ChIP-Seq |
250 |
bacterial |
microorganism |
An Osmoregulatory Mechanism Operating through OmpR and LrhA Controls the Motile-Sessile Switch in the Plant Growth-Promoting Bacterium Pantoea alhagi |
APPLIED AND ENVIRONMENTAL MICROBIOLOGY |
3.807 |
2019 |
RNA-Seq |
251 |
mouse |
animal |
Metabolic Profiling of Tumors, Sera, and Skeletal Muscles from an Orthotopic Murine Model of Gastric Cancer Associated-Cachexia |
JOURNAL OF PROTEOME RESEARCH |
4.268 |
2019 |
RNA-Seq |
252 |
Human cell line |
human |
Targeting super-enhancer-driven oncogenic transcription by CDK7 inhibition in anaplastic thyroid cancer |
THYROID |
5.515 |
2019 |
RNA-Seq&ChIP-Seq |
253 |
Caenorhabditis elegans |
animal |
Gene-level quantitative trait mapping in an expanded C. elegans multiparent experimental evolution panel |
bioRxiv |
|
2019 |
WGS |
254 |
tomato |
plant |
Characterization the complete chloroplast genome of the tomato (Solanum lycopersicum L.) from China |
MITOCHONDR DNA part B |
0.488 |
2019 |
chloroplast Sequencing |
255 |
Pathogen |
microorganism |
High‐throughput identification and diagnostics of pathogens and pests: Overview and practical recommendations |
Molecular Ecology Resources |
7.332 |
2018 |
Pathogen detection |
256 |
porcine sapelovirus |
microorganism |
Characterization and epidemiological survey of porcine sapelovirus in China |
Veterinary Microbiology |
2.628 |
2019 |
Pathogen detection |
257 |
Salmonella enteritidis |
microorganism |
Increased growth rate and amikacin resistance of Salmonella enteritidis after one‐month spaceflight on China’s Shenzhou‐11 spacecraft |
Microbiologyopen |
2.747 |
2019 |
Pathogen detection |
258 |
Fungus |
microorganism |
Intercellular communication is required for trap formation in the nematode-trapping fungus Duddingtonia flagrans |
PLOS.Genetics |
5.54 |
2019 |
RNA-Seq |
259 |
Human cell line |
human |
Next-Generation Sequencing Analysis of mRNA Profile in Cisplatin-Resistant Gastric Cancer Cell Line SGC7901 |
Med Sci Monit |
1.585 |
2019 |
RNA-Seq |
260 |
Verticillium dahliae |
microorganism |
Genomewide Transcriptome Profiles Reveal How Bacillus subtilis Lipopeptides Inhibit Microsclerotia Formation in Verticillium dahliae |
MOLECULAR PLANT-MICROBE INTERACTIONS |
4.332 |
2019 |
RNA-Seq |
261 |
Human cell line |
human |
Human UTP14a promotes angiogenesis through upregulating PDGFA expression in colorectal cancer |
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS |
2.466 |
2019 |
RNA-Seq |
262 |
Chlorella |
plant |
The Complete Chloroplast Genome of Tetraselmis desikacharyi (Chlorodendrophyceae) and Phylogenetic Analysis |
Mitochondrial DNA Part B |
0.48 |
2019 |
chloroplast Sequencing |
263 |
Flatworm |
animal |
Complete mitogenome of the giant invasive hammerhead flatworm Bipalium kewense |
MITOCHONDR DNA part B |
0.488 |
2019 |
MtDNA sequencing |
264 |
virus |
microorganism |
The complete nucleotide sequence and genome organization of a novel virus of the order Tymovirales isolated from Prunus davidiana (Carr.) Franch. in Liaoning, China |
Archives of Virology |
2.058 |
2019 |
Small RNA |
265 |
Monascus |
microorganism |
A Comprehensive Analysis of the Small GTPases Ypt7 Involved in the Regulation of Fungal Development and Secondary Metabolism in Monascus ruber M7 |
Frontiers in Microbiology |
4.076 |
2019 |
RNA-Seq |
266 |
corn |
plant |
Maize VIVIPAROUS1 Interacts with ABA INSENSITIVE5 to Regulate GALACTINOL SYNTHASE2 Expression Controlling Seed Raffinose Accumulation |
Journal of Agricultural and Food Chemistry |
3.154 |
2019 |
RNA-Seq |
267 |
Human cell line |
human |
Exosome-Mediated Delivery of Inducible miR-423-5p Enhances Resistance of MRC-5 Cells to Rabies Virus Infection |
International Journal of Molecular Sciences |
3.226 |
2019 |
Small RNA |
268 |
Human cell line |
human |
MicroRNA profiling of plasma exosomes from patients with ovarian cancer using high?throughput sequencing |
Oncology Letters |
1.664 |
2019 |
Small RNA |
269 |
Zebrafish |
animal |
Acute exposure to ustiloxin A affects growth and development of early life zebrafish, Danio rerio |
Chemosphere |
4.208 |
2019 |
RNA-Seq |
270 |
Mouse |
animal |
Identification of key genes, pathways, and miRNA/mRNA regulatory networks of CUMS-induced depression in nucleus accumbens by integrated bioinformatics analysis |
Neuropsychiatric Disease and Treatment |
2.198 |
2019 |
RNA-seq&Small RNA |
271 |
metagenome |
microorganism |
A multi-omic cohort as a reference point for promoting a healthy human gut microbiome |
bioRxiv |
|
2019 |
metagenome |
272 |
human |
human |
Identifying a BRCA2 c.5722_5723del mutation in a Han-Chinese family with breast cancer |
BIOSCIENCE REPORTS |
2.906 |
2019 |
WES |
273 |
Sorghum |
plant |
Characterization of the complete chloroplast genome of the Chinese sorghum, Sorghum bicolor from China |
MITOCHONDR DNA part B |
0.488 |
2019 |
chloroplast Sequencing |
274 |
Whale |
animal |
The Marine Mammal Class II Major Histocompatibility Complex Organization |
Frontiers in Immunology |
6.429 |
2019 |
WGS |
275 |
grass carp |
animal |
Transcriptome analysis of rare minnow (Gobiocypris rarus) infected by the grass carp reovirus |
Fish & Shellfish Immunology |
3.185 |
2019 |
RNA-Seq |
276 |
Human cell line |
human |
Irradiation-induced dynamic changes of gene signatures reveal gain of metastatic ability in nasopharyngeal carcinoma |
American Journal of Cancer Research |
3.998 |
2019 |
RNA-Seq |
277 |
Cartilage fish |
animal |
Dynamic chromosome rearrangements of the white-spotted bamboo shark shed light on cartilaginous fish diversification mechanisms |
bioRxiv |
|
2019 |
WGS&Hi-C library&RNA-Seq |
278 |
human |
human |
Novel DPY19L2 variants in globozoospermic patients and the overcoming this male infertility |
ASIAN JOURNAL OF ANDROLOGY |
3.259 |
2019 |
WES |
279 |
Mouse |
animal |
Pharmacological and transcriptome profiling analyses of Fufang E'jiao Jiang during chemotherapy-induced myelosuppression in mice |
Journal of Ethnopharmacology |
3.115 |
2019 |
RNA-Seq |
280 |
human |
human |
Whole genome sequencing reveals complexity in both HPV sequences present and HPV integrations in HPV-positive oropharyngeal squamous cell carcinomas |
BMC Cancer |
3.288 |
2019 |
WGS |
281 |
Cattle |
animal |
Genomic variants identified from whole-genome resequencing of indicine cattle breeds from Pakistan |
Plos one |
2.766 |
2019 |
WGS |
282 |
frog |
animal |
Integrated mRNA and miRNA expression profile analyses reveal the potential roles of sex‐biased miRNA–mRNA pairs in gonad tissues of the Chinese concave‐eared torrent frog (Odorrana tormota) |
JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION |
2.432 |
2019 |
RNA-seq&Small RNA |
283 |
Arabidopsis thaliana |
plant |
The H3K27me3 demethylase REF6 promotes leaf senescence through directly activating major senescence regulatory and functional genes in Arabidopsis |
PLOS.Genetics |
5.54 |
2019 |
RNA-Seq |
284 |
Collembola |
animal |
Developmental Expression and Evolution of Hexamerin and Hemocyanin from Folsomia candida (Collembola) |
INSECT MOLECULAR BIOLOGY |
2.492 |
2019 |
RNA-Seq |
285 |
Mouse |
animal |
Butyrate Protects Mice from Clostridium difficile-Induced Colitis through an HIF-1-Dependent Mechanism |
Cell Reports |
8.282 |
2019 |
RNA-Seq |
286 |
human |
human |
Frizzled 2‐induced epithelial‐mesenchymal transition correlates with vasculogenic mimicry, stemness, and Hippo signaling in hepatocellular carcinoma |
cancer science |
4.372 |
2019 |
RNA-Seq |
287 |
Streptococcus thermophilus |
microorganism |
Study on high throughput sequencing genomic DNA extraction of streptococcus scarlet fever |
South China Journal Of Preventive Medicine(china) |
|
2019 |
Pathogen detection |
288 |
broad bean |
plant |
Identification and Characterization of Salt-Responsive MicroRNAs in Vicia faba by High-Throughput Sequencing |
genes |
3.191 |
2019 |
Small RNA |
289 |
Human cell line |
human |
Ai-lncRNA EGOT enhancing autophagy sensitizes paclitaxel cytotoxicity via upregulation of ITPR1 expression by RNA-RNA and RNA-protein interactions in human cancer |
Molecular Cancer |
7.776 |
2019 |
ChIP-seq |
290 |
human |
human |
Single cell RNA sequencing reveals cellular diversity of trisomy 21 retina |
bioRxiv |
|
2019 |
scRNA-Seq |
291 |
human |
human |
Single cell RNA-seq reveals cellular diversity and developmental characteristics of human infant retina |
bioRxiv |
|
2019 |
scRNA-Seq |
292 |
corn |
plant |
Transcriptome Dynamics of Double Recessive Mutant, o2o2o16o16, Reveals the Transcriptional Mechanisms in the Increase of Its Lysine and Tryptophan Content in Maize |
genes |
3.191 |
2019 |
RNA-Seq |
293 |
Human cell line |
human |
LFMD: detecting low-frequency mutations in genome sequencing data without molecular tags |
bioRxiv |
|
2019 |
MtDNA sequencing |
294 |
Mouse |
animal |
YAP Aggravates Inflammatory Bowel Disease by Regulating M1/M2 Macrophage Polarization and Gut Microbial Homeostasis |
Cell Reports |
8.282 |
2019 |
RNA-Seq |
295 |
Mouse |
animal |
Pioneering function of Isl1 in the epigenetic control of cardiomyocyte cell fate |
CELL RESEARCH |
15.393 |
2019 |
RNA-Seq |
296 |
Zebrafish |
animal |
Primary cilia regulate hematopoietic stem and progenitor cell specification through Notch signaling in zebrafish |
Nature Communications |
12.124 |
2019 |
RNA-seq |
297 |
Human cell line |
human |
Translation of the circular RNA circβ-catenin promotes liver cancer cell growth through activation of the Wnt pathway |
Genome Biology |
13.214 |
2019 |
RNA-seq |
298 |
Monarch butterfly |
animal |
Transcriptomics of monarch butterflies (Danaus plexippus) reveals strong differential gene expression in response to host plant toxicity, but weak response to parasite infection |
bioRxiv |
|
2019 |
RNA-seq |
299 |
metagenome |
microorganism |
Taxonomic and Functional Characterization of the Microbial Community During Spontaneous in vitro Fermentation of Riesling Must |
Frontiers in Microbiology |
4.076 |
2019 |
metagenome |
300 |
Soy |
plant |
Integration of metabolome and transcriptome analyses highlights soybean roots responding to phosphorus deficiency by modulating phosphorylated metabolite processes |
Plant Physiology and Biochemistry |
2.718 |
2019 |
RNA-seq |
301 |
Human cell line |
human |
ZBTB24 regulates the apoptosis of human T cells via CDCA7/TRAIL-receptor axis |
Biochemical and Biophysical Research Communications |
2.559 |
2019 |
RNA-seq |
302 |
yeast |
microorganism |
High production of fatty alcohols in Yarrowia lipolytica by coordination with glycolysis |
Science China Chemistry |
|
2019 |
RNA-seq |
303 |
Human cell line |
human |
A reference system for BRCA mutation detection based on next-generation sequencing in the Chinese population |
JOURNAL OF MOLECULAR DIAGNOSTICS |
4.88 |
2019 |
capture |
304 |
pig |
animal |
Transcriptomic analysis of small intestinal mucosa from porcine epidemic diarrhea virus infected piglets |
Microbial Pathogenesis |
2.332 |
2019 |
RNA-seq |
305 |
Human cell line |
human |
Nobiletin exhibits potent inhibition on tumor necrosis factor alpha‐induced calcification of human aortic valve interstitial cells via targeting ABCG2 and AKR1B1 |
Phytotherapy researcch |
3.349 |
2019 |
RNA-seq |
306 |
Human cell line |
human |
Establishment and characterization of a novel childhood acute lymphoblastic leukemia cell line, HXEX-ALL1, with chromosome 9p and 17p deletions |
Cancer Cell International |
3.96 |
2019 |
WGS |
307 |
Human cell line |
human |
Nutrient Sensing by the Intestinal Epithelium Orchestrates Mucosal Antimicrobial Defense via Translational Control of Hes1 |
Cell Host & Microbe |
17.872 |
2019 |
RNA-seq |
308 |
Human cell line |
human |
Genetic Regulation of enoyl-CoA hydratase Domain-Containing 3 in Adipose Tissue Determines Insulin Sensitivity in African Americans and Europeans |
DIABETES |
7.273 |
2019 |
RNA-seq |
309 |
Mouse |
animal |
Dean flow assisted single cell and bead encapsulation for high performance single cell expression profiling |
ACS Sensors |
5.711 |
2019 |
scRNA-Seq |
310 |
human |
human |
Germline-encoded TCR-MHC contacts promote TCR V gene bias in umbilical cord blood T cell repertoire |
bioRxiv |
|
2019 |
MHC capture |
311 |
Muhe |
plant |
Anticandidal Potential of Stem Bark Extract from Schima superba and the Identification of Its Major Anticandidal Compound |
molecule |
3.098 |
2019 |
RNA-seq |
312 |
Mouse |
animal |
Rescue of Retinal Degeneration in rd1 Mice by Intravitreally Injected Metformin |
frontiers in Molecular Neuroscience |
3.902 |
2019 |
RNA-seq |
313 |
Pathogen |
microorganism |
Clinical value of whole genome sequencing in severe sepsis and cluster nursing intervention |
Journal of clinical and Pathological Research(china) |
|
2019 |
Pathogen detection |
314 |
Pathogen |
microorganism |
The application of next-generation sequencing in diagnosing invasive pulmonary aspergillosis:three case reports |
American Journal of Translational Research |
3.061 |
2019 |
Pathogen detection |
315 |
Bovine herpesvirus 1 |
microorganism |
Cellular microRNA bta-miR-2361 inhibits bovine herpesvirus 1 replication by directly targeting EGR1 gene |
Veterinary Microbiology |
2.524 |
2019 |
Pathogen detection |
316 |
Zebrafish |
animal |
Estrogen accelerates heart regeneration by promoting inflammatory responses in zebrafish |
bioRxiv |
|
2019 |
RNA-seq |
317 |
umbilical cord blood cell |
human |
Single-cell transcriptomic landscape of nucleated cells in umbilical cord blood |
GigaScience |
7.267 |
2019 |
scRNA-Seq |
318 |
Mouse |
animal |
Short-term High Fructose Intake Reprograms the Transcriptional Clock Rhythm of the Murine Extraorbital |
Investigative Ophthalmology & Visual Science |
3.388 |
2019 |
RNA-seq |
319 |
Human cell line |
human |
Sequential treatment failures in response to BRAF/MEK and immune checkpoint inhibitors mediated by MAP2K2 and B2M mutations in melanoma |
Experimental and Molecular Pathology |
2.566 |
2019 |
WES |
320 |
Human cell line |
human |
Cancer‐associated fibroblasts contribute to cisplatin resistance by modulating ANXA3 in lung cancer cells |
cancer science |
4.372 |
2019 |
RNA-seq |
321 |
human |
human |
Genetic and clinical findings in a large cohort of Chinese patients with suspected retinitis pigmentosa |
AMERICAN JOURNAL OF OPHTHALMOLOGY |
4.795 |
2019 |
WES |
322 |
human |
human |
Bismuth drugs tackle Porphyromonas gingivalis and attune cytokine response in human cells |
Metallomics |
4.069 |
2019 |
RNA-seq |
323 |
Mouse |
animal |
Ferulic acid altered IL-17A/IL-17RA interaction and protected against imiquimod-induced psoriasis-like skin injury in mice |
Food and Chemical Toxicology |
3.977 |
2019 |
RNA-seq |
324 |
Mouse |
animal |
Alterations in transcriptome and antioxidant activity of naturally aged mice exposed to selenium-rich rice |
ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH |
2.8 |
2019 |
RNA-seq |
325 |
Mouse |
animal |
Integrated Omics Reveals Tollip as an Aggravator and Therapeutic Target for Hepatic Ischemia‐Reperfusion Injury in Mice |
hepatology |
13.246 |
2019 |
RNA-seq |
326 |
human |
human |
Screening, prenatal diagnosis, and prenatal decision for sex chromosome aneuploidy |
Expert Review of Molecular Diagnostics |
3.326 |
2019 |
NIFTY |
327 |
human |
human |
Breast milk alkylglycerols sustain beige adipocytes through adipose tissue macrophages |
JOURNAL OF CLINICAL INVESTIGATION |
13.251 |
2019 |
RNA-seq |
328 |
Zebrafish |
animal |
Loss-of-function of sox3 causes follicle development retardation and reduces fecundity in zebrafish |
Protein & Cell |
6.228 |
2019 |
RNA-seq |
329 |
Rice |
plant |
A nucleus-localized PPR protein OsNPPR1 is important for mitochondrial function and endosperm development in rice |
JOURNAL OF EXPERIMENTAL BOTANY |
5.354 |
2019 |
RNA-seq |
330 |
Echinococcus |
animal |
Long-read sequencing reveals a 4.4 kb tandem repeat region in the mitogenome of Echinococcus granulosus (sensu stricto) genotype G1 |
Parasites & Vectors |
3.163 |
2019 |
MtDNA sequencing |
331 |
Mouse |
animal |
Embryoid body-based RNA-seq analyses reveal a potential TBBPA multifaceted developmental toxicity |
Journal of Hazardous Materials |
6.434 |
2019 |
RNA-seq |
332 |
Human cell line |
human |
Glutaminyl cyclase inhibitor contributes to the regulation of HSP70, HSP90, actin, and ribosome on gene and protein levels in vitro |
JOURNAL OF CELLULAR BIOCHEMISTRY |
2.959 |
2018 |
RNA-seq |
333 |
|
|
Next-Generation Sequencing and Emerging Technologies |
SEMINARS IN THROMBOSIS AND HEMOSTASIS |
3.345 |
2019 |
review |
334 |
palmatum |
plant |
Comparative transcriptome analysis of genes involved in response to thermal stress and leaf colour change of Acer palmatum |
Scientia Horticulturae |
1.624 |
2019 |
RNA-seq |
335 |
Human cell line |
human |
ZEB1 Represses Neural Differentiation and Cooperates with CTBP2 to Dynamically Regulate Cell Migration during Neocortex Development |
cell reports |
8.282 |
2019 |
RNA-seq |
336 |
Rat |
animal |
Transcriptome profiling of dorsal root ganglia in a rat model of complex regional pain syndrome type-I reveals potential mechanisms involved in pain |
Journal of Pain Research |
2.645 |
2019 |
RNA-seq |
337 |
crab |
animal |
Transcriptomic analysis provides insight into the mechanism of salinity adjustment in swimming crab Portunus trituberculatus |
Genes & Genomics |
0.68 |
2019 |
RNA-seq |
338 |
virus |
microorganism |
Full genome sequence of a novel potexvirus from Euonymus bungeanus Maxim based on RNA-Seq analysis |
Archives of Virology |
2.16 |
2019 |
RNA-seq |
339 |
Mouse |
animal |
Hepatic Interferon Regulatory Factor 6 Alleviates Liver Steatosis and Metabolic Disorder by Transcriptionally Suppressing Peroxisome Proliferator‐Activated Receptor γ in Mice |
hepatology |
13.246 |
2019 |
RNA-seq |
340 |
actinobacterium |
microorganism |
Aeromicrobium endophyticum sp. nov., an endophytic actinobacterium isolated from reed (Phragmites australis) |
Journal of Microbiology |
2.319 |
2019 |
WGS |
341 |
human |
human |
Analysis of Normal Tissues Adjacent to the Tumour-specific expressed genes in Breast Cancer |
Hereditas(Beijing) |
|
2019 |
RNA-seq |
342 |
E.coli |
microorganism |
Multifaceted Stoichiometry Control of Bacterial Operons Revealed by Deep Proteome Quantification |
frontiers in genetics |
4.151 |
2019 |
RNA-seq |
343 |
Human cell line |
human |
The E3 ligase VHL promotes follicular helper T cell differentiation via glycolytic-epigenetic control |
JOURNAL OF EXPERIMENTAL MEDICINE |
10.79 |
2019 |
RNA-seq |
344 |
Arabidopsis thaliana |
plant |
mTERF5 Acts as a Transcriptional Pausing Factor to Positively Regulate Transcription of Chloroplast psbEFLJ |
molecular plant |
9.326 |
2019 |
RNA-seq |
345 |
metagenome |
microorganism |
Altered respiratory virome and serum cytokine profile associated with recurrent respiratory tract infections in children |
Nature Communications |
12.124 |
2019 |
Pathogen detection |
346 |
|
|
SEQdata-BEACON: a comprehensive database of sequencing performance and statistical tools for performance evaluation and yield simulation in BGISEQ-500 |
bioRxiv |
|
2019 |
Database&statistical tools |
347 |
Human cell line |
human |
Pyroptosis of MCF7 Cells Induced by the Secreted Factors of hUCMSCs |
Stem Cells International |
3.989 |
2019 |
RNA-seq |
348 |
Human cell line |
human |
Prospect and challenge of detecting dynamic gene copy number increases in stem cells by whole genome sequencing |
Journal of Molecular Medicine |
4.938 |
2019 |
WGS |
349 |
human |
human |
Germline DNA damage repair gene alterations in Chinese prostate patients: More than HRR and MMR |
2019 ASCO Annual Meeting Abstracts |
|
2019 |
WES |
350 |
human |
human |
A multi-institutional investigation assessing prevalence of germline genetic alterations in Chinese patients with gastric carcinoma |
2019 ASCO Annual Meeting Abstracts |
|
2019 |
capture |
351 |
Clinopodium chinense |
plant |
Transcriptome Analysis of Clinopodium chinense (Benth.) O. Kuntze and Identification of Genes Involved in Triterpenoid Saponin Biosynthesis |
International Journal of Molecular Sciences |
3.226 |
2019 |
RNA-seq |
352 |
Mouse |
animal |
Transcriptional Profiling of Daily Patterns of mRNA Expression in the C57BL/6J Mouse Cornea |
CURRENT EYE RESEARCH |
2.12 |
2019 |
RNA-seq |
353 |
metagenome |
microorganism |
Age-dependent sexual dimorphism in the adult human gut microbiota |
bioRxiv |
|
2019 |
metagenome |
354 |
Chlorella |
plant |
Sequencing and comparative analysis of three Chlorella genomes provide insights into strain-specific adaptation to wastewater |
bioRxiv |
|
2019 |
RNA-seq |
355 |
mouse |
animal |
Proteomics and Transcriptomics Analysis Reveals Clues into the Mechanism of the Beneficial Effect of Electrical Stimulation on Rat Denervated Gastrocnemius Muscle |
Cellular Physiology and Biochemistry |
5.5 |
2019 |
RNA-seq |
356 |
human |
human |
Prenatal Diagnosis of Fetuses with Increased Nuchal Translucency by Genome Sequencing Analysis |
bioRxiv |
|
2019 |
CNV-seq |
357 |
Human cell line |
human |
c-Jun Overexpressing CAR-T Cells are Exhaustion-Resistant and Mediate Enhanced Antitumor Activity |
bioRxiv |
|
2019 |
RNA-seq |
358 |
mouse |
animal |
Interleukin-17 receptor D constitutes an alternative receptor for interleukin-17A important in psoriasis-like skin inflammation |
Science Immunology |
|
2019 |
RNA-seq |
359 |
mouse |
animal |
Activation of P-TEFb by cAMP-PKA signaling in autosomal dominant polycystic kidney disease |
Science Advances |
11.511 |
2019 |
RNA-Seq&ChIP-Seq |
360 |
mouse |
animal |
The transcription factor Shox2 shapes thalamocortical neuron firing properties by regulation of key ion channels |
bioRxiv |
|
2019 |
RNA-seq |
361 |
Arabidopsis thaliana |
plant |
Overexpression of AtAGT1 promoted root growth and development during seedling establishment |
Plant Cell Reports |
2.989 |
2019 |
RNA-seq |
362 |
Human cell line |
human |
STYK1 promotes tumor growth and metastasis by reducing SPINT2/HAI-2 expression in non-small cell lung cancer |
Cell Death & Disease |
5.638 |
2019 |
RNA-seq |
363 |
human |
human |
A truncating CLDN9 variant is associated with autosomal recessive nonsyndromic hearing loss |
Human Genetics |
3.93 |
2019 |
WGS |
364 |
Pathogen |
microorganism |
The diagnostic value of metagenomic next-generation sequencing for identifying Streptococcus pneumoniae in paediatric bacterial meningitis |
BMC Infectious Diseases |
2.62 |
2019 |
Pathogen detection |
365 |
Bacillus thuringiensis |
microorganism |
Transcriptome profiling analysis of the intoxication response in midgut tissue of Agrotis ipsilon larvae to Bacillus thuringiensis Vip3Aa protoxin |
Pesticide Biochemistry and Physiology |
3.44 |
2019 |
RNA-seq |
366 |
human |
human |
Development of coupling controlled polymerizations by adapter-ligation in mate-pair sequencing for detection of various genomic variants in one single assay |
DNA RESEARCH |
5.415 |
2019 |
long mate pair library |
367 |
|
|
Actualités du séquen?age d’ADN-Chroniques génomiques |
Med Sci (Paris) |
|
2019 |
review |
368 |
|
|
All Aboard The Genome Exprees: Is a new generation of DNA sequencing technology about to hit the fast track? |
Genetic Engineering & Biotechnology New |
|
2019 |
review |
369 |
|
|
Arthropod Genome Sequencing and Assembly Strategies |
Insect Genomics |
|
2019 |
review |
370 |
|
|
Clinical metagenomic next-generation sequencing for pathogen detection |
Annual Review of Pathology: Mechanisms of Disease |
|
2019 |
review |
371 |
metagenome |
microorganism |
Exploring the human microbiome: The potential future role of next-generation sequencing in disease diagnosis and treatment |
Frontiers in Immunology |
5.511 |
2019 |
review |
372 |
nasopharyngeal carcinoma |
human |
FOXA1 reprograms the TGF-β-stimulated transcriptional program from a metastasis promoter to a tumor suppressor in nasopharyngeal carcinoma |
Cancer letters |
6.491 |
2019 |
RNA-seq |
373 |
|
|
High-throughput sequencing for the aetiologic identification of viral encephalitis, meningoencephalitis and meningitis A narrative review and clinical appraisal |
Clinical Microbiology and Infection |
5.394 |
2019 |
review |
374 |
Caenorhabditis elegans |
animal |
Systematic evaluation of C elegans lincRNAs with CRISPR knockout mutants |
Genome Biology |
13.214 |
2019 |
lncRNA |
375 |
Tobacco |
plant |
Tolerance of Transplastomic Tobacco Plants Overexpressing a Theta Class Glutathione Transferase to Abiotic and Oxidative Stresses |
Front. Plant Sci |
3.678 |
2019 |
RNA-Seq |
376 |
haematococcus pluvialis |
plant |
Comparative transcriptome analysis of a long-time span two-step culture process reveals a potential mechanism for astaxanthin and biomass hyper-accumulation in Haematococcus pluvialis JNU35 |
Biotechnol Biofuels |
5.497 |
2019 |
RNA-Seq&Transcriptome Sequencing |
377 |
Mouse |
animal |
Identifcation of key genes, pathways, and miRNA/mRNA regulatory networks of CUMS-induced depression in nucleus accumbens by integrated bioinformatics analysis |
Neuropsychiatric Disease and Treatment |
2.195 |
2019 |
RNA-Seq&Small RNA |
378 |
Wallemia mellicola |
microorganism |
Genomic Evidence of Recombination in the Basidiomycete Wallemia mellicola |
genes |
3.191 |
2019 |
WGS |
379 |
gastric cancer |
human |
LncRNA TUBA4B functions as a competitive endogenous RNA to inhibit gastric cancer progression by elevating PTEN via sponging miR-214 and miR-216a/b |
Cancer Cell International |
3.96 |
2019 |
lncRNA |
380 |
human |
human |
A comprehensive assessment of Next‐Generation Sequencing variants validation using a secondary technology |
Molecular Genetics & Genomic Medicine |
2.695 |
2019 |
capture |
381 |
Spodoptera frugiperda |
animal |
Chromosome level draft genomes of the fall armyworm, Spodoptera frugiperda (Lepidoptera: Noctuidae), an alien invasive pest in China |
bioRxiv |
2019 |
stLFR |
|
382 |
human |
human |
Differential Roles of the mTOR-STAT3 Signaling in Dermal γδ T Cell Effector Function in Skin Inflammation |
cell reports |
8.032 |
2019 |
RNA-seq |
383 |
Mouse |
animal |
Hyaluronan synthase 2–mediated hyaluronan production mediates Notch1 activation and liver fibrosis |
Science Translational Medicine |
16.71 |
2019 |
RNA-seq |
384 |
gastric cancer |
human |
Hydroxychloroquine enhances the antitumor effects of BC001 in gastric cancer |
International Journal of Oncology |
3.333 |
2019 |
RNA-seq |
385 |
rice |
plant |
The nuclear-localized PPR protein OsNPPR1 is important for mitochondrial function and endosperm development in rice |
Journal of experimental botany |
5.354 |
2019 |
RNA-seq |
386 |
virus |
microorganism |
Differential expression profiling of lncRNAs related to Epstein‐Barr virus infection in epithelial cells |
JOURNAL OF MEDICAL VIROLOGY |
1.988 |
2019 |
lncRNA |
387 |
Pathogen |
microorganism |
Metagenomic Next-generation Sequencing of Cerebrospinal Fluid for the Diagnosis of Central Nervous System Infections: A Multicentre Prospective Study |
bioRxiv |
|
2019 |
Pathogen detection |
388 |
|
plant |
A symbiotic balancing act: arbuscular mycorrhizal specificity and specialist fungus gnat pollination in the mycoheterotrophic genus Thismia (Thismiaceae) |
Annals of Botany |
3.646 |
2019 |
WGS |
389 |
Lotus |
plant |
Transcription Profiles Reveal the Regulatory Synthesis of Phenols during the Development of Lotus Rhizome (Nelumbo nucifera Gaertn) |
International Journal of Molecular Sciences |
3.687 |
2019 |
RNA-seq |
390 |
Atlantic herring |
animal |
A chromosome-level assembly of the Atlantic herring – detection of a supergene and other signals of selection |
bioRxiv |
|
2019 |
Hi-C library |
391 |
metagenome |
microorganism |
Distinct gut metagenomics and metaproteomics signatures in prediabetics and treatment-na?ve type 2 diabetics |
bioRxiv |
|
2019 |
metagenome |
392 |
lung cancer |
human |
Irradiation increases the immunogenicity of lung cancer cells and irradiation-based tumor cell vaccine elicits tumor-specific T cell responses in vivo |
OncoTargets and Therapy |
2.656 |
2019 |
RNA-seq |
393 |
Mouse |
animal |
Changes in mRNA of liver immune-related genes in obese mice induced by long-term high-fat diet |
chinese Journal of cellular and molecular immunology(china) |
|
2019 |
RNA-seq |
394 |
Pathogen |
microorganism |
Diagnosis of osteoarticular tuberculosis via metagenomic next?generation sequencing: A case report |
Experimental and Therapeutic Medicine |
1.41 |
2019 |
Pathogen detection |
395 |
anemone |
animal |
Combined transcriptomic and proteomic analysis reveals a diversity of venom-related and toxin-like peptides expressed in the mat anemone Zoanthus natalensis (Cnidaria, Hexacorallia) |
Archives of Toxicology |
5.728 |
2019 |
RNA-seq |
396 |
CD4+ T cells |
human |
Transcriptome Dynamics Reveals Progressive Transition from Effector to Memory in CD4+ T cells |
bioRxiv |
|
2019 |
scRNA-Seq |
397 |
Chicken |
animal |
Integrative Analyses of mRNA Expression Profile Reveal the Involvement of IGF2BP1 in Chicken Adipogenesis |
International Journal of Molecular Sciences |
4.183 |
2019 |
RNA-seq |
398 |
human |
human |
Muscle-strain injury exudate favors acute tissue healing and prolonged connective tissue formation in humans |
FASEB JOURNAL |
5.391 |
2019 |
RNA-seq |
399 |
Medicago truncatula |
plant |
MtBZR1 Plays an Important Role in Nodule Development in Medicago truncatula |
International Journal of Molecular Sciences |
4.183 |
2019 |
RNA-seq |
400 |
Lung adenocarcinoma |
human |
Lung adenocarcinoma-intrinsic GBE1 signaling inhibits anti-tumor immunity |
BMC Genomics |
3.501 |
2019 |
RNA-seq |
401 |
pig |
animal |
Comprehensive transcriptomic view of the role of the LGALS12 gene in porcine subcutaneous and intramuscular adipocytes |
Molecular Cancer |
10.679 |
2019 |
RNA-seq |
402 |
human |
human |
Delta-like ligand 4/DLL4 regulates the capillarization of liver sinusoidal endothelial cell and liver fibrogenesis |
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH |
4.739 |
2019 |
RNA-seq |
403 |
Tea Polyphenols |
plant |
Pathogenic Effects and Potential Regulatory Mechanisms of Tea Polyphenols on Obesity |
BioMed Research International |
2.197 |
2019 |
Small RNA |
404 |
sarcoma |
human |
Probabilistic modeling of personalized drug combinations from integrated chemical screen and molecular data in sarcoma |
BMC Cancer |
2.933 |
2019 |
WES |
405 |
hepar |
human |
Hepatocyte TRAF6 Aggravates Hepatic Inflammation and Fibrosis by Promoting Lys6‐ Linked Polyubiquitination of ASK1 |
hepatology |
14.971 |
2019 |
RNA-seq |
406 |
human |
human |
Clinical diagnosis of single-gene disorders and chromosomal abnormalities based on BGISEQ-500 platform |
bioRxiv |
|
2019 |
capture |
407 |
metagenome |
microorganism |
Shotgun Metagenomics of 361 elderly women reveals gut microbiome change in bone mass loss |
bioRxiv |
|
2019 |
metagenome |
408 |
human |
human |
Mixed-lineage leukemia protein 2 suppresses ciliary assembly by the modulation of actin dynamics and vesicle transport |
Cell Discovery |
4.6 |
2019 |
RNA-seq |
409 |
Human cell line |
human |
Systematic comparison of germline variant calling pipelines cross multiple next-generation sequencers |
Scientific Reports |
4.01 |
2019 |
WGS&WES |
410 |
noroviruses |
microorganism |
Replication and transcriptionomic analysis of human noroviruses in human intestinal enteroids |
American Journal of Translational Research |
3.266 |
2019 |
RNA-seq |
411 |
Goose |
animal |
Endoplasmic Reticulum Stress Marker Gene Grp78 Is Involved in Regulation of Immune/Inflammatory State of Goose Fatty Liver |
Acta Veterinaria et Zootechnica Sinica(china) |
|
2019 |
RNA-seq |
412 |
metagenome |
microorganism |
Alterations in the human gut microbiome associated with Helicobacter pylori infection |
FEBS open bio |
1.959 |
2019 |
metagenome |
413 |
human |
human |
Expanding the Clinical Spectrum of Osteogenesis Imperfecta Type V: 13 Additional Patients and Review |
Frontiers in Endocrinology |
3.634 |
2019 |
WES |
414 |
Tea |
plant |
Integrated transcriptomic and phytochemical analyses provide insights into characteristic metabolites variation in leaves of 1-year-old grafted tea (Camellia sinensis) |
Tree Genetics & Genomes |
1.862 |
2019 |
RNA-seq |
415 |
leukocyte |
human |
Assessment of the gene expression profiles of leukocytes from different isolations |
bioRxiv |
|
2019 |
RNA-seq |
416 |
carcinoma |
human |
Fumaratehydratase-deficient renal cell carcinoma: a clinicopathological and molecular study of 13 cases |
Journal of Clinical Pathology |
2.346 |
2019 |
WGS |
417 |
Yellow Mottle Disease |
microorganism |
Identification and Characterization of a Novel Emaravirus Associated With Jujube (Ziziphus jujuba Mill.) Yellow Mottle Disease |
Frontiers in Microbiology |
4.259 |
2019 |
Small RNA |
418 |
Neuroblastoma |
human |
Exosomal hsa-miR199a-3p Promotes Proliferation and Migration in Neuroblastoma |
Frontiers in oncology |
4.137 |
2019 |
Small RNA |
419 |
breast cancer |
human |
CD137 promotes bone metastasis of breast cancer by enhancing the migration and osteoclast differentiation of monocytes/macrophages |
Theranostics |
8.063 |
2019 |
RNA-seq |
420 |
Human cell line |
human |
Fas signaling-mediated TH9 cell differentiation favors bowel inflammation and antitumor functions |
Nature Communications |
11.878 |
2019 |
RNA-seq |
421 |
Arabidopsis thaliana |
plant |
RAP2.4c and RAP2.4d in the regulation of cold stress and cold priming in Arabidopsis thaliana |
REPOSITORIUM DER FREIEN UNIVERSIT?T BERLIN(Germany) |
|
2019 |
RNA-seq |
422 |
chronic lymphocytic leukemia |
human |
Elevated FANCA expression determines a worse prognosis in chronic lymphocytic leukemia and interferes with p53 function |
FASEB JOURNAL |
5.391 |
2019 |
RNA-seq |
423 |
Melanocytes |
human |
The Long Noncoding RNA UCA1 Negatively Regulates Melanogenesis in Melanocytes |
Journal of Investigative Dermatology |
6.29 |
2019 |
lncRNA |
424 |
Poncirus trifoliata |
plant |
Enhanced ROS scavenging and sugar accumulation contribute to drought tolerance of naturally occurring autotetraploids in Poncirus trifoliata |
PLANT BIOTECHNOLOGY JOURNAL |
6.84 |
2018 |
RNA-seq |
425 |
Ancient Mammals |
animal |
Improving Species Identification of Ancient Mammals Based on Next-Generation Sequencing Data |
genes |
3.331 |
2019 |
WGS |
426 |
metagenome |
microorganism |
Compositional and functional features of the female premenopausal and postmenopausal gut microbiota |
FEBS LETTERS |
2.675 |
2019 |
metagenome |
427 |
Pathogen |
microorganism |
Genome-wide Transcript Structure Resolution Reveals Abundant Alternate Isoform Usage from Murine Gammaherpesvirus 68 |
cell reports |
7.82 |
2019 |
RNA-seq |
428 |
CADASIL |
human |
Novel and Recurring NOTCH3 Mutations in Two Chinese Patients with CADASIL |
Neurodegenerative Diseases |
2.80 |
2019 |
WES |
429 |
metagenome |
microorganism |
A survey of the sperm whale (Physeter catodon) commensal microbiome |
PeerJ |
2.35 |
2019 |
metagenome |
430 |
nasopharyngeal carcinoma |
human |
DHRS2 mediates cell growth inhibition induced by Trichothecin in nasopharyngeal carcinoma |
Journal of Experimental & Clinical Cancer Research |
5.65 |
2019 |
RNA-seq |
431 |
metagenome |
microorganism |
Calorie restriction intervention induces enterotype-associated BMI loss in nonobese individuals |
bioRxiv |
|
2019 |
metagenome |
432 |
Scutellaria |
plant |
The complete chloroplast genome of Scutellaria indica var. coccinea (Lamiaceae), an endemic taxon in Korea |
Mitochondrial DNA Part B-Resources |
0.561 |
2019 |
chloroplast Sequencing |
433 |
Firmiana |
plant |
Comparative analyses of chloroplast genomes among three Firmiana species: Identification of mutational hotspots and phylogenetic relationship with other species of Malvaceae |
plant gene |
|
2019 |
chloroplast Sequencing |
434 |
Immune Cell |
human |
A Single-Cell Immune Atlas of Triple Negative Breast Cancer Reveals Novel Immune Cell Subsets |
bioRxiv |
|
2019 |
scRNA-Seq |
435 |
Candida albicans |
microorganism |
Susceptibility to Medium-Chain Fatty Acids Is Associated with Trisomy of Chromosome 7 in Candida albicans |
mSphere |
4.447 |
2019 |
WGS |
436 |
Cancer Cells |
human |
Engineering Forward Genetics into Cultured Cancer Cells for Chemical Target Identification |
cell chemical biology |
6.762 |
2019 |
WES |
437 |
zebrafish |
animal |
Pioneer and repressive functions of p63 during zebrafish embryonic ectoderm specification |
Nature Communications |
11.878 |
2019 |
RNA-seq |
438 |
Monascus |
microorganism |
Effects of Different G-Protein α-Subunits on Growth, Development and Secondary Metabolism of Monascus ruber M7 |
Frontiers in Microbiology |
4.259 |
2019 |
RNA-seq |
439 |
banana |
plant |
Characterization of the complete chloroplast genome of Sanming wild banana (Musa itinerans) and phylogenetic relationships |
Mitochondrial DNA Part B-Resources |
0.561 |
2019 |
chloroplast Sequencing |
440 |
kumquat |
plant |
Characterization of the complete chloroplast genome of the Hongkong kumquat (Fortunella hindsii Swingle) |
Mitochondrial DNA Part B-Resources |
0.561 |
2019 |
chloroplast Sequencing |
441 |
Pedicularis |
plant |
The complete chloroplast genome of Pedicularis alaschanica (Orobanchaceae) |
Mitochondrial DNA Part B-Resources |
0.561 |
2019 |
chloroplast Sequencing |
442 |
Kuepferia otophora |
plant |
The complete chloroplast genome sequence of an Alpine flowering plant Kuepferia otophora (Gentianaceae) |
Mitochondrial DNA Part B-Resources |
0.561 |
2019 |
chloroplast Sequencing |
443 |
bacteria |
microorganism |
Response of Cupriavidus basilensis B-8 to CuO nanoparticles enhances Cr(VI) reduction |
Science of The Total Environment |
5.59 |
2019 |
RNA-seq |
444 |
Human cell line |
human |
RNA-Bloom provides lightweight reference-free transcriptome assembly for single cells |
bioRxiv |
|
2019 |
scRNA-Seq |
445 |
Passiflora edulia Sims |
plant |
Characterization of the complete chloroplast genome of a purple passion flower variety ‘Pingtang No.1’ (Passiflora edulia Sims) in China and phylogenetic relationships |
Mitochondrial DNA Part B-Resources |
0.561 |
2019 |
chloroplast Sequencing |
446 |
Tetraena mongolica Maxim |
plant |
De novo transcriptome sequencing and identification of genes related to salt and PEG stress in Tetraena mongolica Maxim |
Trees |
1.799 |
2019 |
De novo transcriptome |
447 |
Nasopharyngeal Carcinoma |
human |
Detection and Analysis of RNAs Expression Profile for Methylated Candidate Tumor Suppressor Genes in Nasopharyngeal Carcinoma |
Anti-Cancer Agents in Medicinal Chemistry |
2.18 |
2019 |
RNA-seq |
448 |
colorectal cancer cells |
human |
Exosomal transfer of p-STAT3 promotes acquired 5-FU resistance in colorectal cancer cells |
Journal of Experimental & Clinical Cancer Research |
5.65 |
2019 |
RNA-seq |
449 |
human embryonic stem cell |
human |
Toxicogenomic analyses of the effects of BDE-47/209, TBBPA/S and TCBPA on early neural development with a human embryonic stem cell in vitro differentiation system |
Toxicology and Applied Pharmacology |
3.585 |
2019 |
RNA-seq |
450 |
Lactobacillus casei |
microorganism |
A single bacterium restores the microbiome dysbiosis to protect bones from destruction in a rat model of rheumatoid arthritis |
Microbiome |
10.465 |
2019 |
metagenome |
451 |
Gomphonemopsis sieminskae |
plant |
Morphology and molecular phylogeny of Gomphonemopsis sieminskae sp. nov. isolated from brackish waters of the East China Sea coast |
Plant and Fungal Systematics |
|
2019 |
WGS |
452 |
metagenome |
microorganism |
Gut microbiome affects the response to anti-PD-1 immunotherapy in patients with hepatocellular carcinoma |
Journal for ImmunoTherapy of Cancer |
8.68 |
2019 |
metagenome |
453 |
Human cell line |
human |
Impact of sequencing depth and technology on de novo RNA-Seq assembly |
BMC Genomics |
3.501 |
2019 |
De novo transcriptome |
454 |
Gerbera jamesonii Bolus |
plant |
Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationships |
Mitochondrial DNA Part B-Resources |
0.561 |
2019 |
chloroplast Sequencing |
455 |
human |
human |
Identification of a novel EVC variant in a Han‐Chinese family with Ellis‐van Creveld syndrome |
Molecular Genetics & Genomic Medicine |
2.448 |
2019 |
WES |
456 |
Arabidopsis thaliana |
plant |
m5C Methylation Guides Systemic Transport of Messenger RNA over Graft Junctions in Plants |
current biology |
9.193 |
2019 |
MeRIP |
457 |
Glioblastoma |
human |
Genome‐Wide CRISPR‐Cas9 Screening Identifies NF‐κB/E2F6 Responsible for EGFRvIII‐Associated Temozolomide Resistance in Glioblastoma |
Advanced Science |
15.804 |
2019 |
RNA-seq |
458 |
Haemonchus contortus |
animal |
Dafachronic acid promotes larval development in Haemonchus contortus by modulating dauer signalling and lipid metabolism |
PLoS Pathogens |
6.463 |
2019 |
RNA-seq |
459 |
Phanerochaete chrysosporium |
microorganism |
Sulfadiazine biodegradation by Phanerochaete chrysosporium: Mechanism and degradation product identification |
Chemosphere |
5.108 |
2019 |
RNA-seq |
460 |
mouse |
animal |
Regulation of the inflammatory response by vascular grafts modified with Aspirin-Triggered Resolvin D1 promotes blood vessel regeneration |
Acta Biomaterialia |
6.638 |
2019 |
RNA-seq |
461 |
Barley |
plant |
Knockout of the HvCKX1 or HvCKX3 Gene in Barley (Hordeum vulgare L.) by RNA-Guided Cas9 Nuclease Affects the Regulation of Cytokinin Metabolism and Root Morphology |
Cells |
5.656 |
2019 |
RNA-seq |
462 |
tobacco |
plant |
Expression of AtLEC2 and AtIPTs promotes embryogenic callus formation and shoot regeneration in tobacco |
BMC Plant Biology |
3.67 |
2019 |
RNA-seq |
463 |
insect |
plant |
Prospects and challenges of implementing DNA metabarcoding for high-throughput insect surveillance |
GigaScience |
7.27 |
2019 |
review |
464 |
soybean |
plant |
Transcriptomic analysis reveals the possible roles of sugar metabolism and export for positive mycorrhizal growth responses in soybean |
Physiologia Plantarum |
3.00 |
2018 |
RNA-seq |
465 |
periodontitis |
human |
M1 macrophages regulate TLR4/AP1 via paracrine to promote alveolar bone destruction in periodontitis |
Oral Diseases |
2.63 |
2019 |
RNA-seq |
466 |
Human cell line |
human |
Epigenetic alterations are associated with tumor mutation burden in non-small cell lung cancer |
Journal for ImmunoTherapy of Cancer |
8.676 |
2019 |
WES |
467 |
Chelmon rostratus |
animal |
Chromosome-level genome assembly of a butterflyfish, Chelmon rostratus |
bioRxiv |
|
2019 |
stLFR |
468 |
Human cell line |
human |
Identification of Main Genetic Causes Responsible for Non-Syndromic Hearing Loss in a Peruvian Population |
genes |
3.331 |
2019 |
WGS |
469 |
Human cell line |
human |
Bioinformatic Analysis of Transcriptomic Data Reveals Novel Key Genes Regulating Osteogenic Differentiation of Human Adipose Stem Cells |
Stem Cells International |
3.902 |
2019 |
RNA-seq |
470 |
mice |
animal |
Hyperuricemia is associated with impaired intestinal permeability in mice |
American Journal of Physiology-Gastrointestinal and Liver Physiology |
3.729 |
2019 |
RNA-seq |
471 |
Aspergillus cristatus |
microorganism |
Genetic Basis and Function of Mating-Type Genes in Aspergillus cri |