|
species |
Publications |
Journal Title |
IF |
Year |
Techology |
|
leaf beetle |
Comparative transcriptome analysis of chemosensory genes in two sister leaf beetles provides insights into chemosensory speciation. |
Insect Biochemistry and Molecular Biology |
3.756 |
2016 |
RNA-Seq |
|
human |
cPAS-based sequencing on the BGISEQ-500 to explore small non-coding RNAs |
Clinical Epigenetics |
4.987 |
2016 |
Small RNA |
|
human |
Establishment of a normal-derived estrogen receptor-positive cell line comparable to the prevailing human breast cancer subtype |
Oncotarget |
5.168 |
2017 |
RNA-Seq |
|
human |
Overexpression of placenta specific 8 is associated with malignant progression and poor prognosis of clear cell renal cell carcinoma |
International Urology and Nephrology |
1.564 |
2017 |
RNA-Seq |
|
Rice |
Overexpression of OsHSP18.0-CI Enhances Resistance to Bacterial Leaf Streak in Rice |
Rice |
3.739 |
2017 |
RNA-Seq |
|
Klebsiella |
Coordination of metabolic pathways: Enhanced carbon conservation in 1,3-propanediol production by coupling with optically pure lactate biosynthesis |
Metabolic Engineering |
8.142 |
2017 |
RNA-Seq |
|
human |
A reference human genome dataset of the BGISEQ-500 sequencer |
GigaScience |
7.267 |
2017 |
WGS |
|
Rhodiola crenulata |
Draft genome sequence of the Tibetan medicinal herb, Rhodiola crenulata |
GigaScience |
7.267 |
2017 |
RNA-Seq |
|
Drosophila |
Drug induces depression-like phenotypes and alters gene expression profiles in Drosophila |
Brain Research Bulletin |
3.033 |
2017 |
RNA-Seq |
|
Dog&wolf |
Comparative performance of the BGISEQ-500 versus Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing |
GigaScience |
7.267 |
2017 |
WGS |
|
human |
Recessive mutation in EXOSC3 associates with mitochondrial dysfunction and pontocerebellar hypoplasia |
Mitochondrion |
3.704 |
2017 |
RNA-Seq |
|
oilseed rape |
Genome-scale mRNA transcriptomic insights into the responses of oilseed rape (Brassica napus L.) to varying boron availabilities |
Plant and Soil |
3.052 |
2017 |
RNA-Seq |
|
Mouse |
Nuclear carbonic anhydrase 6B associates with PRMT5 to epigenetically promote IL-12 expression in innate response |
PNAS |
9.661 |
2017 |
RNA-Seq&ChIP-Seq |
|
human |
Methyltransferase SETD2-Mediated Methylation of STAT1 Is Critical for Interferon Antiviral Activity |
Cell |
30.41 |
2017 |
RNA-Seq |
|
Arabidopsis thaliana |
AtACS8 plays a critical role in the early biosynthesis of ethylene elicited by copper ions in Arabidopsis |
Journal of Cell Science |
4.431 |
2017 |
RNA-Seq |
|
human |
The FOXN3-NEAT1-SIN3A repressor complex promotes progression of hormonally responsive breast cancer. |
The Journal of Clinical Investigation |
12.784 |
2017 |
ChIP-Seq |
|
Amphioxus |
Transcriptome-wide analysis of immune-responsive microRNAs against poly (I:C) challenge in Branchiostoma belcheri by deep sequencing and bioinformatics |
Oncotarget |
5.168 |
2017 |
Small RNA |
|
human |
PBRM1 restricts the basal activity of innate immune system through repressing RIG-I-like receptor signaling and is a potential prognostic biomarker for colon cancer |
The Journal of Pathology |
6.894 |
2017 |
RNA-Seq |
|
Amphioxus |
Exploring gene expression changes in the amphioxus gill after poly(I:C) challenge using digital expression profiling |
Fish & Shellfish Immunology |
3.148 |
2017 |
RNA-Seq |
|
Sea cucumber |
Genome-wide analysis of gene expression profile in the respiratory tree of sea cucumber (Apostichopus japonicus) in response to hypoxia conditions |
Journal of the Marine Biological Association of the United Kingdom |
1.038 |
2017 |
RNA-Seq |
|
human |
FH535 Inhibits Proliferation and Motility of Colon Cancer Cells by Targeting Wnt/β-catenin Signaling Pathway |
Journal of Cancer |
2.916 |
2017 |
RNA-Seq |
|
Mouse |
Data Descriptor: RNA sequencing analysis of activated macrophages treated with the anti-HIV ABX464 in intestinal inflammation |
Scientific Data |
4.836 |
2017 |
RNA-Seq |
|
Mouse |
Orally Administrated Baker’s Yeast beta-Glucan Promotes Glucose and Lipid Homeostasis in the Livers of ob/ob Mice |
Journal of Agricultural and Food Chemistry |
3.154 |
2017 |
RNA-Seq |
|
Bradysia odoriphaga |
Using Next-Generation Sequencing to Detect Differential Expression Genes in Bradysia odoriphaga after Exposure to Insecticides |
International Journal of Molecular Sciences |
3.226 |
2017 |
RNA-Seq |
|
Antler cup coral |
Systemic response of the stony coral Pocillopora damicornis against acute cadmium stress |
Aquatic Toxicology |
4.129 |
2017 |
RNA-Seq |
|
Mouse |
Characteristics of NK cells from leukemic microenvironment in MLL-AF9 induced acute myeloid leukemia |
Molecular Immunology |
3.236 |
2017 |
RNA-Seq |
|
Sea cucumber |
Differential gene expression in the intestine of sea cucumber (Apostichopus japonicus) under low and high salinity conditions |
Comparative Biochemistry and Physiology D-Genomics & Proteomics |
2.857 |
2017 |
RNA-Seq |
|
Human cell line |
Dual inhibition of DNMTs and EZH2 can overcome both intrinsic and acquired resistance of myeloma cells to IMiDs in a cereblon‐independent manner |
Molecular oncology |
5.314 |
2017 |
RNA-seq |
|
Human leukemia |
Heterogeneous effects of M-CSF isoforms on the progression of MLL-AF9 leukemia |
Immunology and cell biology |
4.557 |
2017 |
RNA-seq |
|
Ramie |
Gene expression profiling of ramie roots during hydroponic induction and adaption to aquatic environment |
Genomics Data |
2.801 |
2017 |
RNA-Seq |
|
human |
Direct inhibition of ACTN4 by ellagic acid limits breast cancer metastasis via regulation of β-catenin stabilization in cancer stem cells |
Journal of Experimental & Clinical Cancer Research |
5.189 |
2017 |
RNA-Seq |
|
Penicillium |
Identification of differentially expressed genes involved in spore germination of Penicillium expansum by comparative transcriptome and proteome approaches |
MicrobiologyOpen |
2.747 |
2017 |
RNA-Seq |
|
Pancreatic ductal adenocarcinoma |
High expression of diffuse panbronchiolitis critical region 1 gene promotes cell proliferation, migration and invasion in pancreatic ductal adenocarcinoma |
Biochemical and Biophysical Research Communications |
2.466 |
2017 |
RNA-Seq |
|
human |
Probing impaired neurogenesis in human brain organoids exposed to alcohol |
Integrative Biology |
3.252 |
2017 |
RNA-Seq |
|
human |
Assessment of the cPAS-based BGISEQ-500 platform for metagenomic sequencing |
GigaScience |
7.267 |
2017 |
metagenome |
|
Salt grass |
Transcriptome sequencing and comparative analysis of differentially-expressed isoforms in the roots of Halogeton glomeratus under salt stress |
Gene |
2.415 |
2017 |
RNA-Seq |
|
Green carp |
Transcriptomic analysis reveals transgenerational effect of hypoxia on the neural control of testicular functions |
Aquatic Toxicology |
4.129 |
2017 |
RNA-Seq |
|
Mouse |
Effects of In Utero PFOS Exposure on Transcriptome, Lipidome and Function of Mouse Testis |
Environmental Science & Technology |
6.198 |
2017 |
RNA-Seq |
|
human |
Germline and somatic variant identification using BGISEQ-500 and HiSeq X Ten whole genome sequencing |
PLOS ONE |
3.057 |
2018 |
WGS |
|
Snail&oyster |
Conserved and ubiquitous expression of piRNAs and PIWI genes in mollusks antedates the origin of somatic PIWI/piRNA expression to the root of bilaterians |
bioRxiv |
|
2018 |
Small RNA |
|
Arabidopsis thaliana |
Phytochrome A Negatively Regulates the Shade Avoidance Response by Increasing Auxin/Indole Acidic Acid Protein Stability |
Developmental Cell |
9.174 |
2018 |
RNA-Seq |
|
watermelon |
Comparative transcriptome analysis reveals key genes potentially related to soluble sugar and organic acid accumulation in watermelon |
PLOS ONE |
3.057 |
2018 |
RNA-Seq |
|
Artemisia annua |
A novel HD-ZIP IV/MIXTA complex promotes glandular trichome initiation and cuticle development in Artemisia annua |
New Phytologist |
7.33 |
2018 |
RNA-Seq |
|
human |
A novel mutation in PRPF31, causative of autosomal dominant retinitis pigmentosa, using the BGISEQ-500 sequencer |
International journal of ophthalmology |
1.1 |
2018 |
WES |
|
Rat |
Preinduction with bone morphogenetic protein-2 enhances cardiomyogenic differentiation of c-kit+ mesenchymal stem cells and repair of infarcted myocardium |
International Journal of Cardiology |
6.189 |
2018 |
RNA-seq |
|
Arabidopsis thaliana |
The GARP/MYB-related grape transcription factor AQUILO improves cold tolerance and promotes the accumulation of raffinose family oligosaccharides |
Journal of Experimental Botany |
5.83 |
2018 |
RNA-seq |
|
human |
An integrated biomanufacturing platform for the large-scale expansion and neuronal differentiation of human pluripotent stem cell-derived neural progenitor cells" |
Acta Biomaterialia |
6.319 |
2018 |
RNA-seq |
|
Mouse |
Cambogin suppresses dextran sulphate sodium‐induced colitis by enhancing Treg cell stability and function |
British journal of pharmacology |
5.49 |
2018 |
RNA-seq |
|
Human cell line |
FBXL10 contributes to the development of diffuse large B-cell lymphoma by epigenetically enhancing ERK1/2 signaling pathway |
Cell death & disease |
5.965 |
2018 |
RNA-seq |
|
Arabidopsis thaliana |
Arabidopsis thaliana ACS8 plays a crucial role in the early biosynthesis of ethylene elicited by Cu2+ ions |
JOURNAL OF CELL SCIENCE |
4.431 |
2018 |
RNA-seq |
|
Mouse |
Dual extra-retinal origins of microglia in the model of retinal microglia repopulation |
Cell Discovery |
|
2018 |
RNA-Seq |
|
human |
Overcoming erlotinib resistance in EGFR mutation-positive lung adenocarcinomas through repression of phosphoglycerate dehydrogenase |
Theranostics |
8.766 |
2018 |
RNA-Seq |
|
Pea |
A small set of differentially expressed genes was associated with two color morphs in natural populations of the pea aphid Acyrthosiphon pisum |
Gene |
2.415 |
2018 |
RNA-Seq |
|
human |
Selenite and methylseleninic acid epigenetically affects distinct gene sets in myeloid leukemia: A genome wide epigenetic analysis |
Free Radical Biology and Medicine |
5.606 |
2018 |
RNA-Seq |
|
Mouse |
Repopulated microglia are solely derived from the proliferation of residual microglia after acute depletion |
Nature Neuroscience |
17.839 |
2018 |
RNA-Seq |
|
metagenome |
A novel affordable reagent for room temperature storage and transport of fecal samples for metagenomic analyses |
Microbiome |
8.496 |
2018 |
metagenome |
|
tomato |
Transcriptome resequencing analysis of the responses of Ty5-Mediated resistance to TYLCV via in resistant vs. susceptible tomato cultivars |
PeerJ |
2.17 |
2018 |
RNA-seq |
|
metagenome |
Efficacy and safety of faecal microbiota transplantation in patients with psoriatic arthritis: protocol for a 6-month, double-blind, randomised, placebo-controlled trial |
BMJ OPEN |
2.369 |
2018 |
metagenome |
|
Human cell line |
Autophagy mediates glucose starvation-induced glioblastoma cell quiescence and chemoresistance through coordinating cell metabolism, cell cycle, and survival |
Cell death & disease |
5.965 |
2018 |
RNA-seq |
|
Mouse |
KRAB-type zinc-finger proteins PITA and PISA specifically regulate p53-dependent glycolysis and mitochondrial respiration |
Cell research |
15.606 |
2018 |
RNA-seq |
|
Mouse |
The LIS1/NDE1 Complex Is Essential for FGF Signaling by Regulating FGF Receptor Intracellular Trafficking |
Cell Reports |
8.282 |
2018 |
RNA-Seq |
|
plant |
A guide to sequence your favorite plant genomes |
Applications in plant sciences |
1.49 |
2018 |
Review |
|
Human gastric cancer |
The lncRNA MACC1-AS1 promotes gastric cancer cell metabolic plasticity via AMPK/Lin28 mediated mRNA stability of MACC1 |
Molecular Cancer |
6.204 |
2018 |
RNA-seq |
|
Rhizopus |
Comparative genome-wide analysis of extracellular small RNAs from the mucormycosis pathogen Rhizopus delemar |
Scientific Reports |
4.259 |
2018 |
Small RNA |
|
Thyroid cancer |
TBX3 promotes proliferation of papillary thyroid carcinoma cells through facilitating PRC2-mediated p57KIP2 repression |
Oncogene |
7.519 |
2018 |
RNA-seq |
|
Gastric cancer |
Silkworm Pupa Protein Hydrolysate Induces Mitochondria-Dependent Apoptosis and S Phase Cell Cycle Arrest in Human Gastric Cancer SGC-7901 Cells |
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES |
3.226 |
2018 |
RNA-seq |
|
Arabidopsis thaliana |
Hydrogen peroxide positively regulates brassinosteroid signaling through oxidation of the BRASSINAZOLE-RESISTANT1 transcription factor |
Nature Communications |
12.124 |
2018 |
RNA-seq |
|
Human cell line |
Small molecules capable of activating DNA methylation–repressed genes targeted by the p38 mitogen-activated protein kinase pathway |
Journal of Biological Chemistry |
4.125 |
2018 |
RNA-seq |
|
Mouse |
PAF-Myc-Controlled Cell Stemness Is Required for Intestinal Regeneration and Tumorigenesis |
Developmental cell |
9.174 |
2018 |
RNA-seq |
|
leukemia |
Leukemia cell-derived microvesicles induce T cell exhaustion via miRNA delivery |
OncoImmunology |
7.719 |
2018 |
RNA-seq |
|
Saccharomyces cerevisiae |
RNA-Seq analysis of global transcriptomic changes suggests a roles for the MAPK pathway and carbon metabolism in cell wall maintenance in a Saccharomyces cerevisiae FKS1 mutant |
Biochemical and Biophysical Research Communications |
2.466 |
2018 |
Transcriptome Sequencing |
|
kava |
The biosynthetic origin of psychoactive kavalactones in kava |
bioRxiv |
|
2018 |
Transcriptome Sequencing |
|
Listeria |
Identification and Characterization of als Genes Involved in D-Allose Metabolism in Lineage II Strain of Listeria monocytogenes |
Frontiers in Microbiology |
4.076 |
2018 |
RNA-seq |
|
Cupriavidus |
In Situ Lignin Bioconversion Promotes Complete Carbohydrate Conversion of Rice Straw by Cupriavidus basilensis B-8 |
ACS Sustainable Chemistry & Engineering |
5.95 |
2018 |
RNA-seq |
|
Rat |
Cranial Irradiation Induces Hypothalamic Injury and Late-Onset Metabolic Disturbances in Juvenile Female Rats |
DEVELOPMENTAL NEUROSCIENCE |
3.03 |
2018 |
RNA-seq |
|
human |
Anti?fbrogenic Potential of Mesenchymal Stromal Cells in Treating Fibrosis in Crohn’s Disease |
Digestive Diseases and Sciences |
2.875 |
2018 |
RNA-seq |
|
human |
Quality Control of Next-generation Sequencing-based In vitro Diagnostic Test for Onco-relevant Mutations Using Multiplex Reference Materials in Plasma |
Journal of Cancer |
2.916 |
2018 |
Review |
|
psoriasis |
An Interleukin-25-Mediated Autoregulatory Circuit in Keratinocytes Plays a Pivotal Role in Psoriatic Skin Inflammation |
Immunity |
22.845 |
2018 |
RNA-seq |
|
Human cell line |
Roles of the CSE1L-mediated nuclear import pathway in epigenetic silencing |
PNAS |
9.661 |
2018 |
RNA-seq |
|
Wheat rhizosphere |
The Catabolite Repressor/Activator Cra Is a Bridge Connecting Carbon Metabolism and Host Colonization in the Plant Drought Resistance-Promoting Bacterium Pantoea alhagi LTYR-11Z |
Applied and Environmental Microbiology |
3.807 |
2018 |
RNA-seq |
|
human |
Efficient and unique co-barcoding of second-generation sequencing reads from long DNA molecules enabling cost effective and accurate sequencing, haplotyping, and de novo assembly |
GENOME RESEARCH |
11.922 |
2019 |
stLFR |
|
Corn worm |
Transcriptome profiling reveals differential gene expression of detoxification enzymes in Sitophilus zeamais responding to terpinen-4-ol fumigation |
Pesticide Biochemistry and Physiology |
2.59 |
2018 |
Transcriptome Sequencing |
|
human |
Identification of a mutL?homolog 1 mutation via whole?exome sequencing in a Chinese family with Gardner syndrome |
Molecular Medicine Reports |
1.692 |
2018 |
WES |
|
E.coli |
Differential gene expression in Escherichia coli during aerosolization from liquid suspension |
Applied Microbiology and Biotechnology |
3.42 |
2018 |
RNA-seq |
|
Rat intestine |
A gene catalogue of the Sprague-Dawley rat gut metagenome |
GigaScience |
7.267 |
2018 |
metagenome |
|
Dracaena cambodiana |
Complete plastome sequence of Dracaena cambodiana (Asparagaceae): a species considered “Vulnerable” in Southeast Asia |
Mitochondrial DNA Part B |
0.488 |
2018 |
plastome Sequencing |
|
Human exosomes |
Variants in EXOSC9 Disrupt the RNA Exosome and Result in Cerebellar Atrophy with Spinal Motor Neuronopathy |
The American Journal of Human Genetics |
9.025 |
2018 |
RNA-seq |
|
Oyster |
The Molecular Mechanism Underlying Pro-apoptotic Role of Hemocytes Specific Transcriptional Factor Lhx9 in Crassostrea hongkongensis |
Frontiers in Physiology |
4.134 |
2018 |
RNA-seq |
|
Arabidopsis thaliana |
Overexpression of VaWRKY14 increases drought tolerance in Arabidopsis by modulating the expression of stress-related genes |
Plant Cell Reports |
2.869 |
2018 |
RNA-seq |
|
Salt mustard |
Compositional and transcriptomic analysis associated with cuticle lipid production on rosette and inflorescence stem leaves in the extremophyte Thellungiella salsuginea |
physiologia plantarum |
3.3 |
2018 |
RNA-seq |
|
yeast |
Rapid pathway prototyping and engineering using in vitro and in vivo synthetic genome SCRaMbLE-in methods |
Nature Communications |
12.124 |
2018 |
WGS |
|
Mouse |
Global expression profiling and pathway analysis of mouse mammary tumor reveals strain and stage specific dysregulated pathways in breast cancer progression |
Cell Cycle |
3.53 |
2018 |
RNA-seq |
|
human |
STAG2 deficiency induces interferon responses via cGAS-STING pathway and restricts virus infection |
Nature Communications |
12.124 |
2018 |
RNA-seq |
|
Rice |
DDM1 represses noncoding RNA expression and RNA-directed DNA methylation in heterochromatin |
Plant Physiology |
6.456 |
2018 |
Small RNA |
|
Rhesus monkey |
Genetic screening and multipotency in rhesus monkey haploid neural progenitor cells |
Development |
5.843 |
2018 |
RNA-seq |
|
Human cleft lip |
A novel PTCH1 mutation underlies non‐syndromic cleft lip and/or palate in a Han Chinese family |
oral diseases |
2.01 |
2018 |
WES |
|
Sogatella furcifera |
Comparative transcriptome analysis of Sogatella furcifera (Horváth) exposed to different insecticides |
Scientific Reports |
4.259 |
2018 |
Transcriptome Sequencing |
|
Infective endocarditis |
Identification of pathogens in culture-negative infective endocarditis cases by metagenomic analysis |
Annals of Clinical Microbiology and Antimicrobials |
3.155 |
2018 |
metagenome |
|
human |
Reliable Multiplex Sequencing with Rare Index Mis-Assignment on DNB-Based NGS Platform |
BMC Genomics |
3.73 |
2018 |
WGS&PCR-Free |
|
Human cell line |
Bioengineered Noncoding RNAs Selectively Change Cellular miRNome Profiles for Cancer Therapy |
Journal of Pharmacology and Experimental Therapeutics |
3.867 |
2018 |
RNA-seq&miRNA |
|
Cynoglossus semilaevis |
Transcriptome profiling of immune-responsive genes in the intestine of Cynoglossus semilaevis Günther challenged with Shewanella algae |
Fish & Shellfish Immunology |
3.148 |
2018 |
RNA-seq |
|
tomato |
Expression of grape ACS1 in tomato decreases ethylene and alters the balance between auxin and ethylene during shoot and root formation |
Journal of Plant Physiology |
3.121 |
2018 |
RNA-seq |
|
Ovarian cancer |
C/EBPβ enhances platinum resistance of ovarian cancer cells by reprogramming H3K79 methylation |
Nature Communications |
12.124 |
2018 |
WES |
|
Mycobacterium |
Diagnosis of local hepatic tuberculosis through next-generation sequencing: Smarter, faster and better |
Clinics and Research in Hepatology and Gastroenterology |
2.623 |
2018 |
Pathogen detection |
|
cucumber |
Differential Gene Expression Caused by the F and M Loci Provides Insight Into Ethylene-Mediated Female Flower Differentiation in Cucumber |
Front. Plant Sci. |
3.678 |
2018 |
RNA-seq |
|
Spontaneous preterm birth |
Whole exome sequencing reveals HSPA1L as a genetic risk factor for spontaneous preterm birth |
PLOS.Genetics |
5.54 |
2018 |
WES |
|
Parasitic wasp |
Parasitic insect-derived miRNAs modulate host development |
Nature Communications |
12.124 |
2018 |
Small RNA |
|
human |
The epigenetic modifier PBRM1 restricts the basal activity of the innate immune system by repressing retinoic acid-inducible gene-I-like receptor signalling and is a potential prognostic biomarker for colon cancer. |
J Pathol |
6.253 |
2018 |
RNA-seq |
|
Human cell line |
Mutually exclusive acetylation and ubiquitylation of the splicing factor SRSF5 control tumor growth |
Nature Communications |
12.124 |
2018 |
RNA-Seq |
|
Human interstitial cells |
Differential and Interactive Effects of Substrate Topography and Chemistry on Human Mesenchymal Stem Cell Gene Expression |
International Journal of Molecular Sciences. |
3.687 |
2018 |
RNA-Seq |
|
Arabidopsis thaliana |
Comparative performance of the BGISEQ-500 and Illumina HiSeq4000 sequencing platforms for transcriptome analysis in plants |
Plant Methods |
4.269 |
2018 |
RNA-seq |
|
Rice |
Modulating plant growth–metabolism coordination for sustainable agriculture |
Nature |
41.577 |
2018 |
RNA-Seq&ChIP-Seq |
|
Mouse |
Menin Deficiency Leads to Depressive-like Behaviors in Mice by Modulating Astrocyte-Mediated Neuroinflammation |
Neuron |
14.318 |
2018 |
RNA-Seq |
|
human |
3 Branch ligation: a novelmethod to
ligate |
DNA RES |
5.404 |
2018 |
stLFR |
|
human |
Validation of combinatorial probe–anchor ligation-based sequencing as non-invasive prenatal test for trisomy at a central laboratory |
Ultrasound in Obstetrics & Gynecology |
4.71 |
2017 |
NIFTY |
|
plant |
10KP: A Phylodiverse Genome Sequencing Plan |
GigaScience |
7.267 |
2018 |
COMMENTARY |
|
fish |
Chromosome-level reference genome of the Siamese fighting fish Betta splendens, a model species for the study of aggression |
GigaScience |
7.267 |
2018 |
Hi-C library |
|
tomato |
Comparative Transcriptome Profiling of Two Tomato Genotypes in Response to Potassium-Deficiency Stress |
International Journal of Molecular Sciences |
3.687 |
2018 |
RNA-Seq |
|
human |
The microRNA-29/PGC1α regulatory axis is critical for metabolic control of cardiac function |
PLOS ONE |
3.057 |
2018 |
Small RNA |
|
human |
The metagenome of the female upper reproductive tract |
GigaScience |
7.267 |
2018 |
metagenome |
|
virus |
clinical application of respiratory virus detection by metagenomic next generation sequencing |
Chinese Journal of Nosocomiology |
|
2018 |
metagenome |
|
Alfalfa |
Multiple Regulatory Networks Are Activated during Cold Stress in Medicago sativa L |
International Journal of Molecular Sciences |
3.687 |
2018 |
RNA-Seq |
|
Rat |
Hippocampal gene expression profiling in a rat model of functional constipation reveals abnormal expression genes associated with cognitive function |
Neuroscience Letters |
2.18 |
2018 |
RNA-Seq |
|
human |
Advanced Whole-Genome Sequencing and Analysis of Fetal Genomes from Amniotic Fluid |
Clinical Chemistry |
8.636 |
2018 |
PGS |
|
human |
Isolation and whole genome sequencing of fetal cells from maternal blood towards the ultimate non‐invasive prenatal testing |
PRENATAL DIAGNOSIS |
2.523 |
2017 |
PGS |
|
human |
Multiplex Cell-Free DNA Reference Materials for Quality Control of Next-Generation Sequencing-Based In Vitro Diagnostic Tests of Colorectal Cancer Tolerance |
Journal of Cancer |
2.916 |
2018 |
cfDNA |
|
Mouse |
Glucocorticoid receptor in stromal cells is essential for glucocorticoid-mediated suppression of inflammation in arthritis |
Annals of the Rheumatic Diseases |
12.38 |
2018 |
RNA-Seq |
|
Human cell line |
The epigenetic modifer PBRM1 restricts the basal activity of the innate immune system by repressing retinoic acid-inducible gene-I-like receptor signalling and is a potential prognostic biomarker for colon cancer |
Journal of Pathology |
6.253 |
2018 |
RNA-Seq |
|
Mouse |
Polysaccharides extracted from Phellinus linteus ameliorate high-fat high-fructose diet induced insulin resistance in mice |
Carbohydrate Polymers |
5.158 |
2018 |
RNA-Seq |
|
Zebrafish |
Transcriptome analysis reveals functional roles of nacreous protein N16 in prednisolone-induced osteoporotic zebrafish |
International Journal of Biological Macromolecules |
3.909 |
2018 |
RNA-Seq |
|
peanut |
Comparative transcriptome analysis revealed key factors for differential cadmium transport and retention in roots of two contrasting peanut cultivars |
BMC genomics |
3.73 |
2018 |
RNA-Seq |
|
Alfalfa |
Comparative Transcriptomic and Physiological Analyses of Medicago sativa L. Indicates that Multiple Regulatory Networks Are Activated during Continuous ABA Treatment. |
Int J Mol Sci. |
3.687 |
2018 |
RNA-Seq |
|
Oyster |
Analysis of in situ Transcriptomes Reveals Divergent Adaptive Response to Hyper- and Hypo-Salinity in the Hong Kong Oyster, Crassostrea hongkongensis |
Front. Physiol |
3.394 |
2018 |
RNA-Seq |
|
Heortia vitessoides |
Candidate olfactory genes identified in Heortia vitessoides(Lepidoptera: Crambidae) by antennal transcriptome analysis |
Comparative Biochemistry and Physiology Part D: Genomics and Proteomics |
2.913 |
2018 |
Transcriptome Sequencing |
|
barley |
Transcriptomic comparison of two barley genotypes differing in arsenic tolerance exposed to arsenate and phosphate treatments |
Plant Physiology and Biochemistry |
2.718 |
2018 |
RNA-Seq |
|
alveolar macrophages |
Transcriptome of porcine alveolar macrophages activated by interferon-gamma and lipopolysaccharide |
Biochemical and Biophysical Research Communications |
2.559 |
2018 |
RNA-Seq |
|
Salt grass |
Comparative transcriptome analysis of genes involved in Na+ transport in the leaves of halophyte Halogeton glomeratus |
Gene |
2.498 |
2018 |
RNA-seq |
|
duck |
RNA-Seq analysis of duck embryo fibroblast cell gene expression during the early stage of egg drop syndrome virus infection |
Poultry Science |
2.216 |
2018 |
RNA-Seq |
|
Heortia vitessoides |
De novo assembly and identification of antennal transcriptome reveals an olfactory system in Heortia vitessoides (Lepidoptera: Crambidae) |
PeerJ |
2.17 |
2017 |
Transcriptome Sequencing |
|
Jujube |
Combination of iTRAQ proteomics and RNA-seq transcriptomics reveals jasmonate-related-metabolisms central regulation during the process of Jujube witches’ broom recovery by tetracycline treatment |
Scientia Horticulturae |
1.76 |
2018 |
RNA-seq |
|
human |
The application of NIPT using combinatorial probe-anchor synthesis to identify sex chromosomal aneuploidies (SCAs) in a cohort of 570 pregnancies. |
Mol Cytogenet. |
1.167 |
2018 |
NIFTY |
|
Cell line |
A new massively parallel nanoball sequencing platform for whole exome research |
BMC Bioinformatics |
2.448 |
2019 |
WES |
|
Mouse embryo Stem cells&human K562 cells |
Comparative analysis of sequencing technologies platforms for single-cell transcriptomics |
GENOME BIOLOGY |
13.214 |
2019 |
scRNA-Seq |
|
Purple cabbage, kale |
Maintenance of grafting-induced epigenetic variations in the asexual progeny of Brassica oleracea and B. juncea chimera |
Plant J |
5.97 |
2018 |
Small RNA |
|
Exosomes |
Exosomes derived from preadipocytes improve osteogenic differentiation, potentially via reduced miR?223 expression |
Molecular Medicine Reports |
1.692 |
2018 |
RNA-Seq |
|
Caenorhabditis elegans |
A Persistence Detector for Metabolic Network Rewiring in an Animal |
CELL REP |
8.282 |
2019 |
RNA-Seq |
|
human |
An integrated chromatin accessibility and transcriptome landscape of human pre-implantation embryos |
Nature Communications |
12.124 |
2019 |
ATAC-seq&LiCAT-seq |
|
Gram-positive bacteria |
Functional analysis of Leifsonia xyli subsp. xyli membrane protein gene Lxx18460 (anti-sigma K) |
BMC Microbiol |
2.644 |
2019 |
RNA-Seq |
|
Celastrus angulatus maxim |
De novo leaf and root transcriptome analysis to explore biosynthetic pathway of Celangulin V in Celastrus angulatus maxim |
BMC GENOMICS |
3.729 |
2019 |
RNA-Seq |
|
human |
Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity |
Nature Communications |
12.124 |
2019 |
scCAT-seq |
|
Nematode |
The nuclear hormone receptor NHR-86 controls anti-pathogen responses in C. elegans |
PLOS GENET |
6.1 |
2019 |
RNA-Seq&ChIP-seq |
|
Mouse |
Organic cation transporter 3 (Oct3) is a distinct catecholamines clearance route in adipocytes mediating the beiging of white adipose tissue |
PLOS BIOL |
9.797 |
2019 |
RNA-Seq |
|
Rice |
The basic helix‐loop‐helix transcription factor, OsPIL15, regulates grain size via directly targeting a purine permease gene OsPUP7 in rice |
PLANT BIOTECHNOL J |
7.443 |
2019 |
RNA-Seq |
|
Brassica |
Chromosome level comparative analysis of Brassica genomes |
PLANT MOL BIOL |
3.356 |
2019 |
Hi-C library |
|
human |
CINP is a novel cofactor of KLF5 required for its role in the promotion of cell proliferation, survival and tumor growth |
INT J CANCER |
6.513 |
2019 |
RNA-Seq |
|
human |
Knockdown of KDM2A inhibits proliferation associated with TGF-β expression in HEK293T cell |
MOL CELL BIOL |
4.398 |
2019 |
RNA-Seq |
|
human |
Toxoplasma gondii ROP17 inhibits the innate immune response of HEK293T cells to promote its survival |
PARASITOL RES |
2.329 |
2019 |
RNA-Seq |
|
tomato |
Overexpression of the KNOX gene Tkn4 affects pollen development and confers sensitivity to gibberellin and auxin in tomato |
J PLANT BIOL |
1.437 |
2019 |
RNA-Seq |
|
tomato |
A tomato B‐box protein SlBBX20 modulates carotenoid biosynthesis by directly activating PHYTOENE SYNTHASE 1, and is targeted for 26S proteasome‐mediated degradation |
New Phytologist |
7.33 |
2019 |
RNA-Seq |
|
human |
Frequency of mutations in 21 hereditary breast and ovarian cancer susceptibility genes among high-risk Chinese individuals |
bioRxiv |
|
2019 |
capture |
|
Rice |
Expression of Maize MADS Transcription Factor ZmES22 Negatively Modulates Starch Accumulation in Rice Endosperm |
INT J MOL SCI |
3.226 |
2019 |
RNA-Seq |
|
human |
MicroRNA profiling from dried blood samples |
Critical Reviews in Clinical Laboratory Sciences |
6.481 |
2019 |
Small RNA |
|
Arabidopsis thaliana |
Functional analysis for domains of maize PPR protein EMP5 in RNA editing and plant development in Arabidopsis |
PLANT GROWTH REGUL |
2.646 |
2019 |
RNA-Seq |
|
human |
Human epidermal growth factor receptor 2 amplification as a biomarker for treatment in patients with lymph node?metastatic penoscrotal extramammary Paget's disease |
Oncology Letters |
1.664 |
2019 |
WGS |
|
Grouper |
A chromosome-level genome of black rockfish, Sebastes schlegelii, provides insights into the evolution of live birth |
bioRxiv |
|
2019 |
RNA-Seq&ATAC-seq |
|
Amphioxus |
Genome-wide transcriptional response of microRNAs to the benzo(a)pyrene stresD168:D178s in amphioxus Branchiostoma belcheri |
CHEMOSPHERE |
4.208 |
2019 |
Small RNA |
|
Zebrafish |
Microcystin-LR exposure induced nephrotoxicity by triggering apoptosis in female zebrafish |
CHEMOSPHERE |
4.208 |
2019 |
RNA-Seq |
|
human |
Genomic sequencing and editing revealed the GRM8 signaling pathway as potential therapeutic targets of squamous cell lung cancer |
CANCER LETT |
6.375 |
2019 |
WGS&WES |
|
human |
Nonobese subjects of Bacteroides and Prevotella enterotypes responded differentially to calorie restriction intervention |
bioRxiv |
|
2019 |
metagenome |
|
human |
Dean flow assisted single cell and bead
encapsulation for high |
bioRxiv |
|
2019 |
scRNA-Seq |
|
Alfalfa |
Full-length transcript sequencing and comparative transcriptomic analysis to evaluate the contribution of osmotic and ionic stress components towards salinity tolerance in the roots of cultivated alfalfa (Medicago sativa L.) |
BMC Plant Biology |
3.964 |
2019 |
RNA-Seq |
|
human |
Genome-wide identification of protein binding sites on RNAs in mammalian cells |
Biochemical and Biophysical Research Communications |
2.466 |
2019 |
RPBS-Cap |
|
Amphioxus |
Genome-wide gene expression analysis reveals novel insights into the response to nitrite stress in gills of Branchiostoma belcheri |
CHEMOSPHERE |
4.208 |
2019 |
RNA-Seq |
|
Mouse |
Loss or oncogenic mutation of DROSHA impairs kidney development and function, but is not sufficient for Wilms tumor formation |
INT J CANCER |
6.513 |
2018 |
RNA-Seq |
|
Pathogen |
Pathogens in Patients with Granulomatous lobular mastitis |
INT J INFECT DIS |
2.532 |
2019 |
Pathogen detection |
|
human |
The identification of a transthyretin variant p.D38G in a Chinese family with early-onset leptomeningeal amyloidosis |
Journal of Neurology |
3.783 |
2019 |
WES |
|
bacterial |
MALDI-TOF Characterization of Protein Expression Mutation During Morphological Changes of Bacteria Under the Impact of Antibiotics |
ANAL CHEM |
6.32 |
2019 |
RNA-Seq |
|
Herpes Simplex Viruses |
Identification of Putative UL54 (ICP27) Transcription Regulatory Sequences Binding to Oct-1, v-Myb, Pax-6 and Hairy in Herpes Simplex Viruses |
Journal of Cancer |
2.916 |
2019 |
Pathogen detection |
|
Tropical fruit of Indonesia |
Datasets for genome assembly of six underutilized Indonesian fruits |
Data in Brief |
|
2019 |
WGS |
|
Brassica |
The complete plastid genomes of four species from Brassicales |
MITOCHONDR DNA part B |
0.488 |
2019 |
plastome Sequencing |
|
insect |
Candidate olfactory genes identified in Heortia vitessoides (Lepidoptera: Crambidae) by antennal transcriptome analysis |
Comparative Biochemistry and Physiology Part D: Genomics and Proteomics |
2.857 |
2019 |
RNA-seq |
|
virus |
Genome comparison of African swine fever virus China/2018/AnhuiXCGQ strain and related European p72 Genotype II strains |
TRANSBOUND EMERG DIS |
3.585 |
2019 |
Pathogen detection |
|
Sea worm family |
Complete mitogenome of a Baltic Sea specimen of the non-indigenous polychaete Marenzelleria neglecta |
MITOCHONDR DNA part B |
0.488 |
2019 |
WGS |
|
metagenome |
Metagenomic next-generation sequencing contribution in identifying prosthetic joint infection due to Parvimonas micra: a case report |
journal of Bone and Joint Infection |
|
2019 |
Pathogen detection |
|
White whale |
The first chromosome‐level genome for a marine mammal as a resource to study ecology and evolution |
Molecular Ecology Resources |
7.332 |
2019 |
WGS |
|
metagenome |
The vagino-cervical microbiome as a woman's life history |
bioRxiv |
|
2019 |
metagenome |
|
Danionella translucida |
Hybrid genome assembly and annotation of Danionella translucida |
bioRxiv |
|
2019 |
Transcriptome Sequencing |
|
corn |
Molecular Mechanisms Underlying Increase in Lysine Content of Waxy Maize through the Introgression of the opaque2 Allele |
INT J MOL SCI |
3.226 |
2019 |
RNA-Seq |
|
penguin |
Mitogenomes uncover extinct penguin taxa and reveal island formation as a key driver of speciation |
Molecular Biology and Evolution |
6.202 |
2019 |
WGS |
|
metagenome |
The biodiversity Composition of Microbiome in Ovarian Carcinoma Patients |
Scientific Reports |
4.259 |
2019 |
RNA-Seq |
|
apple |
Methylome and transcriptome analyses of apple fruit somatic mutations reveal the difference of red phenotype |
BMC genomics |
3.73 |
2019 |
RNA-Seq |
|
tomato |
SlMYB75, an MYB-type transcription factor,promotes anthocyanin accumulation and enhances volatile aroma production in tomato fruits |
Horticulture Research |
3.6 |
2019 |
RNA-Seq |
|
Mouse |
The effects of perfluorooctanoate on high fat diet induced non-alcoholic fatty liver disease in mice |
Toxicology |
3.582 |
2019 |
RNA-Seq |
|
|
Molecular digitization of a botanical garden: high-depth whole genome sequencing of 689 vascular plant species from the Ruili Botanical Garden |
GigaScience |
7.267 |
2019 |
WGS |
|
American ginseng |
Characterization of the complete chloroplast genome of American ginseng, Panax quinquefolius L. |
Mitochondrial DNA Part B |
0.488 |
2019 |
chloroplast Sequencing |
|
Nanmu |
Characterization of the complete chloroplast genome of the Phoebe zhennan S. Lee |
Mitochondrial DNA Part B |
0.488 |
2019 |
chloroplast Sequencing |
|
eggplant |
Comparative transcriptome analysis reveals K+ transporter gene contributing to salt tolerance in eggplant |
BMC Plant Biology |
3.964 |
2019 |
RNA-Seq |
|
Mouse |
Eradication of glioblastoma by immuno-virotherapy with a retargeted oncolytic HSV in a preclinical model |
Oncogene |
7.519 |
2019 |
RNA-Seq |
|
Bradysia odoriphaga |
Genome-wide analysis of developmental stage-specific transcriptome in Bradysia odoriphaga |
Comparative Biochemistry and Physiology D-Genomics & Proteomics |
2.857 |
2019 |
RNA-Seq |
|
human |
A Novel Heterozygous Mutation of the COL4A3 Gene Causes a Peculiar Phenotype without Hematuria and Renal Function Impairment in a Chinese Family |
DISEASE MARKERS |
2.348 |
2019 |
WES |
|
human |
Comparative performance of the BGI and Illumina sequencing technology for single-cell RNA sequencing |
bioRxiv |
|
2019 |
scRNA-Seq |
|
Rat |
Anti-senescence role of heterozygous fumarate hydratase gene knockout in rat lung fibroblasts in vitro |
Aging |
5.179 |
2019 |
RNA-Seq |
|
Lactobacillus |
Two Strains of Lactobacilli Effectively Decrease the Colonization of VRE in a Mouse Model |
Frontiers in cellular and Infection Microbiology |
3.52 |
2019 |
RNA-Seq |
|
dog |
Ancient RNA from Late Pleistocene permafrost and historical canids shows tissue-specific transcriptome survival |
bioRxiv |
|
2019 |
RNA-Seq |
|
human |
Diminished OPA1 expression and impaired mitochondrial morphology and homeostasis in Aprataxin-deficient cells |
Nucleic Acids Research |
10.162 |
2019 |
RNA-Seq |
|
human |
Specific Decrease in B-Cell-Derived Extracellular Vesicles Enhances Post-Chemotherapeutic CD8+ T Cell Responses |
Immunity |
22.845 |
2019 |
RNA-Seq |
|
Mouse |
Ex Vivo Hepatocyte Reprograming Promotes Homology‐Directed DNA Repair to Correct Metabolic Disease in Mice After Transplantation |
hepatology communications |
|
2019 |
RNA-Seq |
|
Rodents |
Hepatic IRF6 alleviates liver steatosis and metabolic disorder by transcriptionally suppressing PPARγ |
hepatology |
13.246 |
2019 |
RNA-Seq&ChIP-Seq |
|
Neisseria gonorrhoeae |
Identification and expression analysis of ceftriaxone resistance-related genes in Neisseria gonorrhoeae integrating RNA-Seq data and qRT-PCR validation |
Journal of Global Antimicrobial Resistance |
1.276 |
2019 |
RNA-Seq |
|
human |
Identification of a Heterozygous Mutation in the TGFBI Gene in a Hui-Chinese Family with Corneal Dystrophy |
Journal of Ophthalmology |
1.712 |
2019 |
RNA-Seq |
|
Rice |
OsHLH61-OsbHLH96 influences rice defense to brown planthopper through regulating the pathogen-related genes |
rice |
3.739 |
2019 |
RNA-Seq |
|
Arabidopsis thaliana |
The R2R3-MYB transcription factor MYB49 regulates cadmium accumulation |
Plant physiology |
6.456 |
2019 |
RNA-Seq |
|
oilseed rape |
Transcriptome analysis of the irregular shape of shoot apical meristem in dt (dou tou) mutant of Brassica napus L. |
Molecular Breeding |
2.465 |
2019 |
RNA-Seq |
|
potato |
Sequencing and characterization the complete chloroplast genome of the potato, Solanum tuberosum L. |
MITOCHONDR DNA part B |
0.488 |
2019 |
chloroplast Sequencing |
|
human |
Precisely controlling endogenous protein dosage in hPSCs and derivatives to model FOXG1 syndrome |
Nature Communications |
12.124 |
2019 |
RNA-Seq |
|
Mouse |
Transcriptome Profile in Hippocampus During Acute Inflammatory Response to Surgery: Toward Early Stage of PND |
Frontiers in Immunology |
6.429 |
2019 |
RNA-Seq |
|
Dandelion |
Dandelion polysaccharides exert anticancer effect on Hepatocellular carcinoma by inhibiting PI3K/AKT/mTOR pathway and enhancing immune response |
Journal of Functional Foods |
3.144 |
2019 |
RNA-Seq |
|
peach |
A single nucleotide mutation in GID1c disrupts its interaction with DELLA1 and causes a GA‐insensitive dwarf phenotype in peach |
PLANT BIOTECHNOLOGY JOURNAL |
7.443 |
2019 |
RNA-Seq |
|
Nude mouse |
RREB1-induced upregulation of the lncRNA AGAP2-AS1 regulates the proliferation and migration of pancreatic cancer partly through suppressing ANKRD1 and ANGPTL4 |
Cell Death & Disease |
5.965 |
2019 |
RNA-Seq |
|
human |
CCR7 Chemokine Receptor-Inducible lnc-Dpf3 Restrains Dendritic Cell Migration by Inhibiting HIF-1α-Mediated Glycolysis |
Immunity |
22.845 |
2019 |
RNA-Seq |
|
Mouse |
Intestinal transcriptional profling reveals fava bean-induced immune response in DBA/1 mice |
Biological Research |
1.692 |
2019 |
RNA-Seq |
|
Anabas testudineus |
Transcriptomic analysis of Anabas testudineus and its defensive mechanisms in response to persistent organic pollutants exposure |
SCIENCE OF THE TOTAL ENVIRONMENT |
4.9 |
2019 |
RNA-Seq |
|
Yak |
Nutritional Interventions Improved Rumen Functions and Promoted Compensatory Growth of Growth-Retarded Yaks as Revealed by Integrated Transcripts and Microbiome Analyses |
Frontiers in microbiology |
4.076 |
2019 |
RNA-Seq |
|
human |
The proinflammatory cytokine TNF-α induces DNA demethylation–dependent and –independent activation of interleukin-32 expression |
Journal of Biological Chemistry |
4.125 |
2019 |
RNA-Seq |
|
Diatom |
Complete chloroplast genome of the diatom Skeletonema pseudocostatum from the Western Mediterranean coast of Algeria |
MITOCHONDR DNA part B |
0.488 |
2019 |
chloroplast Sequencing |
|
human |
COL1A2 p.Gly1066Val variant identified in a Han Chinese family with osteogenesis imperfecta type I |
molecular genetics&genomics |
2.979 |
2019 |
WES |
|
human |
Establishment of a human embryonic stem cell-based liver differentiation model for hepatotoxicity evaluations |
Ecotoxicology and Environmental Safety |
3.743 |
2019 |
RNA-Seq |
|
mouse |
Germline deletion of Cdyl causes teratozoospermia and progressive infertility in male mice |
Cell Death & Disease |
5.965 |
2019 |
RNA-seq |
|
human |
Novel GLI3 mutations in Chinese patients with non-syndromic post-axial polydactyly |
CURRENT MOLECULAR MEDICINE |
2.345 |
2019 |
WES |
|
Horseshoe |
RNA-Seq analysis of gene expression during the yellowing developmental process of fresh-cut Chinese water chestnuts |
Scientia Horticulturae |
1.624 |
2019 |
RNA-seq |
|
fish |
Hypoxia causes transgenerational impairment of ovarian development and hatching success in fish |
ENVIRONMENTAL SCIENCE & TECHNOLOGY |
6.198 |
2019 |
RNA-seq |
|
human |
Integrated lipidomics and transcriptomics characterization upon aging related changes of lipid species and pathways in human bone marrow mesenchymal stem cells |
JOURNAL OF PROTEOME RESEARCH |
4.268 |
2019 |
RNA-seq |
|
mouse |
Toxicity Induced by Zirconia Oxide Nanoparticles on Various Organs After Intravenous Administration in Rats |
Journal of Biomedical Nanotechnology |
4.521 |
2019 |
RNA-seq |
|
human |
Comparative analysis of novel MGISEQ-2000 sequencing platform vs Illumina HiSeq 2500 for whole-genome sequencing |
bioRxiv |
|
2019 |
WGS |
|
human |
Nucleoporin Seh1 Interacts with Olig2/Brd7 to Promote Oligodendrocyte Differentiation and Myelination |
Neuron |
14.318 |
2019 |
RNA-seq |
|
human |
Generation of Highly Biomimetic Quality Control Materials for Noninvasive Prenatal Testing Based on Enzymatic Digestion of Matched Mother–Child Cell Lines |
CLINICAL CHEMISTRY |
8.008 |
2019 |
NIFTY |
|
Salvia |
Comparative transcriptomic analysis provides insights into the development of a Salvia splendens Ker-Gawler mutant, SX919M |
PLoS One |
2.806 |
2019 |
RNA-seq |
|
mouse |
Absence of GdX/UBL4A Protects against Inflammatory Diseases by Regulating NF-кB Signaling in Macrophages and Dendritic Cells |
Theranostics |
8.712 |
2019 |
RNA-seq |
|
mouse |
Hypoxic BMSC-derived exosomal miRNAs promote metastasis of lung cancer cells via STAT3-induced EMT |
Molecular Cancer |
6.204 |
2019 |
RNA-seq |
|
Microalgae |
Transcriptomic and lipidomic analysis of an EPA-containing Nannochloropsis sp. PJ12 in response to nitrogen deprivation |
Scientific Reports |
4.259 |
2019 |
RNA-seq |
|
human |
Collaborative ISL1/GATA3 interaction in controlling neuroblastoma oncogenic pathways overlapping with but distinct from MYCN |
Theranostics |
8.712 |
2019 |
RNA-seq |
|
Arabidopsis thaliana |
Comparative physiological and transcriptomic analyses reveal the toxic effects of ZnO nanoparticles on plant growth |
ENVIRONMENTAL SCIENCE & TECHNOLOGY |
6.198 |
2019 |
RNA-seq |
|
Spider Mite |
Identification of Saliva Proteins of the Spider Mite Tetranychus evansi by Transcriptome and LC–MS/MS Analyses |
PROTEOMICS |
4.041 |
2018 |
RNA-seq |
|
Mosquito |
Mosquito Small RNA Responses to West Nile and Insect-Specific Virus Infections in Aedes and Culex Mosquito Cells |
viruses |
3.761 |
2019 |
Small RNA |
|
Rose yellow mosaic virus |
Complete genome sequence of a novel member of the family Potyviridae isolated from Phellodendron amurense Rupr. in Liaoning, China |
ARCHIVES OF VIROLOGY |
2.058 |
2019 |
Small RNA |
|
mouse |
An ATAC-seq atlas of chromatin accessibility in mouse tissues |
bioRxiv |
|
2019 |
ATAC-seq |
|
metagenome |
Life history recorded in the vagino-cervical microbiome |
bioRxiv |
|
2019 |
metagenome |
|
human |
MicroRNA signature of air pollution exposure‐induced congenital defects |
JOURNAL OF CELLULAR PHYSIOLOGY |
4.08 |
2019 |
Small RNA |
|
human |
Decitabine shows synergistic effects with arsenic trioxide against myelodysplastic syndrome cells via endoplasmic reticulum stress-related apoptosis |
Journal of Investigative Medicine |
1.943 |
2019 |
RNA-seq |
|
human |
Panel-based NGS reveals disease-causing mutations in hearing loss patients using BGISEQ-500 platform |
MEDICINE |
1.803 |
2019 |
capture |
|
human |
Super-enhancers: novel target for pancreatic ductal adenocarcinoma |
oncotarget |
5.168 |
2019 |
RNA-Seq&ChIP-Seq |
|
bacterial |
An Osmoregulatory Mechanism Operating through OmpR and LrhA Controls the Motile-Sessile Switch in the Plant Growth-Promoting Bacterium Pantoea alhagi |
APPLIED AND ENVIRONMENTAL MICROBIOLOGY |
3.807 |
2019 |
RNA-Seq |
|
mouse |
Metabolic Profiling of Tumors, Sera, and Skeletal Muscles from an Orthotopic Murine Model of Gastric Cancer Associated-Cachexia |
JOURNAL OF PROTEOME RESEARCH |
4.268 |
2019 |
RNA-Seq |
|
Human cell line |
Targeting super-enhancer-driven oncogenic transcription by CDK7 inhibition in anaplastic thyroid cancer |
THYROID |
5.515 |
2019 |
RNA-Seq&ChIP-Seq |
|
Caenorhabditis elegans |
Gene-level quantitative trait mapping in an expanded C. elegans multiparent experimental evolution panel |
bioRxiv |
|
2019 |
WGS |
|
tomato |
Characterization the complete chloroplast genome of the tomato (Solanum lycopersicum L.) from China |
MITOCHONDR DNA part B |
0.488 |
2019 |
chloroplast Sequencing |
|
Pathogen |
High‐throughput identification and diagnostics of pathogens and pests: Overview and practical recommendations |
Molecular Ecology Resources |
7.332 |
2018 |
Pathogen detection |
|
porcine sapelovirus |
Characterization and epidemiological survey of porcine sapelovirus in China |
Veterinary Microbiology |
2.628 |
2019 |
Pathogen detection |
|
Salmonella enteritidis |
Increased growth rate and amikacin resistance of Salmonella enteritidis after one‐month spaceflight on China’s Shenzhou‐11 spacecraft |
Microbiologyopen |
2.747 |
2019 |
Pathogen detection |
|
Fungus |
Intercellular communication is required for trap formation in the nematode-trapping fungus Duddingtonia flagrans |
PLOS.Genetics |
5.54 |
2019 |
RNA-Seq |
|
Human cell line |
Next-Generation Sequencing Analysis of mRNA Profile in Cisplatin-Resistant Gastric Cancer Cell Line SGC7901 |
Med Sci Monit |
1.585 |
2019 |
RNA-Seq |
|
Verticillium dahliae |
Genomewide Transcriptome Profiles Reveal How Bacillus subtilis Lipopeptides Inhibit Microsclerotia Formation in Verticillium dahliae |
MOLECULAR PLANT-MICROBE INTERACTIONS |
4.332 |
2019 |
RNA-Seq |
|
Human cell line |
Human UTP14a promotes angiogenesis through upregulating PDGFA expression in colorectal cancer |
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS |
2.466 |
2019 |
RNA-Seq |
|
Chlorella |
The Complete Chloroplast Genome of Tetraselmis desikacharyi (Chlorodendrophyceae) and Phylogenetic Analysis |
bioRxiv |
|
2019 |
chloroplast Sequencing |
|
Flatworm |
Complete mitogenome of the giant invasive hammerhead flatworm Bipalium kewense |
MITOCHONDR DNA part B |
0.488 |
2019 |
MtDNA sequencing |
|
virus |
The complete nucleotide sequence and genome organization of a novel virus of the order Tymovirales isolated from Prunus davidiana (Carr.) Franch. in Liaoning, China |
Archives of Virology |
2.058 |
2019 |
Small RNA |
|
Monascus |
A Comprehensive Analysis of the Small GTPases Ypt7 Involved in the Regulation of Fungal Development and Secondary Metabolism in Monascus ruber M7 |
Frontiers in Microbiology |
4.076 |
2019 |
RNA-Seq |
|
corn |
Maize VIVIPAROUS1 Interacts with ABA INSENSITIVE5 to Regulate GALACTINOL SYNTHASE2 Expression Controlling Seed Raffinose Accumulation |
Journal of Agricultural and Food Chemistry |
3.154 |
2019 |
RNA-Seq |
|
Human cell line |
Exosome-Mediated Delivery of Inducible miR-423-5p Enhances Resistance of MRC-5 Cells to Rabies Virus Infection |
International Journal of Molecular Sciences |
3.226 |
2019 |
Small RNA |
|
Human cell line |
MicroRNA profiling of plasma exosomes from patients with ovarian cancer using high?throughput sequencing |
Oncology Letters |
1.664 |
2019 |
Small RNA |
|
Zebrafish |
Acute exposure to ustiloxin A affects growth and development of early life zebrafish, Danio rerio |
Chemosphere |
4.208 |
2019 |
RNA-Seq |
|
Mouse |
Identification of key genes, pathways, and miRNA/mRNA regulatory networks of CUMS-induced depression in nucleus accumbens by integrated bioinformatics analysis |
Neuropsychiatric Disease and Treatment |
2.198 |
2019 |
RNA-seq&miRNA |
|
metagenome |
A multi-omic cohort as a reference point for promoting a healthy human gut microbiome |
bioRxiv |
|
2019 |
metagenome |
|
human |
Identifying a BRCA2 c.5722_5723del mutation in a Han-Chinese family with breast cancer |
BIOSCIENCE REPORTS |
2.906 |
2019 |
WES |
|
Sorghum |
Characterization of the complete chloroplast genome of the Chinese sorghum, Sorghum bicolor from China |
MITOCHONDR DNA part B |
0.488 |
2019 |
chloroplast Sequencing |
|
Whale |
The Marine Mammal Class II Major Histocompatibility Complex Organization |
Frontiers in Immunology |
6.429 |
2019 |
WGS |
|
grass carp |
Transcriptome analysis of rare minnow (Gobiocypris rarus) infected by the grass carp reovirus |
Fish & Shellfish Immunology |
3.185 |
2019 |
RNA-Seq |
|
Human cell line |
Irradiation-induced dynamic changes of gene signatures reveal gain of metastatic ability in nasopharyngeal carcinoma |
American Journal of Cancer Research |
3.998 |
2019 |
RNA-Seq |
|
Cartilage fish |
Dynamic chromosome rearrangements of the white-spotted bamboo shark shed light on cartilaginous fish diversification mechanisms |
bioRxiv |
|
2019 |
WGS&Hi-C library&RNA-Seq |
|
human |
Novel DPY19L2 variants in globozoospermic patients and the overcoming this male infertility |
ASIAN JOURNAL OF ANDROLOGY |
3.259 |
2019 |
WES |
|
Mouse |
Pharmacological and transcriptome profiling analyses of Fufang E'jiao Jiang during chemotherapy-induced myelosuppression in mice |
Journal of Ethnopharmacology |
3.115 |
2019 |
RNA-Seq |
|
human |
Whole genome sequencing reveals complexity in both HPV sequences present and HPV integrations in HPV-positive oropharyngeal squamous cell carcinomas |
BMC Cancer |
3.288 |
2019 |
WGS |
|
Cattle |
Genomic variants identified from whole-genome resequencing of indicine cattle breeds from Pakistan |
Plos one |
2.766 |
2019 |
WGS |
|
frog |
Integrated mRNA and miRNA expression profile analyses reveal the potential roles of sex‐biased miRNA–mRNA pairs in gonad tissues of the Chinese concave‐eared torrent frog (Odorrana tormota) |
JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION |
2.432 |
2019 |
RNA-seq&miRNA |
|
Arabidopsis thaliana |
The H3K27me3 demethylase REF6 promotes leaf senescence through directly activating major senescence regulatory and functional genes in Arabidopsis |
PLOS.Genetics |
5.54 |
2019 |
RNA-Seq |
|
Collembola |
Developmental Expression and Evolution of Hexamerin and Hemocyanin from Folsomia candida (Collembola) |
INSECT MOLECULAR BIOLOGY |
2.492 |
2019 |
RNA-Seq |
|
Mouse |
Butyrate Protects Mice from Clostridium difficile-Induced Colitis through an HIF-1-Dependent Mechanism |
Cell Reports |
8.282 |
2019 |
RNA-Seq |
|
human |
Frizzled 2‐induced epithelial‐mesenchymal transition correlates with vasculogenic mimicry, stemness, and Hippo signaling in hepatocellular carcinoma |
cancer science |
4.372 |
2019 |
RNA-Seq |
|
Streptococcus thermophilus |
Study on high throughput sequencing genomic DNA extraction of streptococcus scarlet fever |
South China Journal Of Preventive Medicine |
|
2019 |
Pathogen detection |
|
broad bean |
Identification and Characterization of Salt-Responsive MicroRNAs in Vicia faba by High-Throughput Sequencing |
genes |
3.191 |
2019 |
miRNA |
|
Human cell line |
Ai-lncRNA EGOT enhancing autophagy sensitizes paclitaxel cytotoxicity via upregulation of ITPR1 expression by RNA-RNA and RNA-protein interactions in human cancer |
Molecular Cancer |
7.776 |
2019 |
ChIP-seq |
|
human |
Single cell RNA sequencing reveals cellular diversity of trisomy 21 retina |
bioRxiv |
|
2019 |
scRNA-Seq |
|
human |
Single cell RNA-seq reveals cellular diversity and developmental characteristics of human infant retina |
bioRxiv |
|
2019 |
scRNA-Seq |
|
corn |
Transcriptome Dynamics of Double Recessive Mutant, o2o2o16o16, Reveals the Transcriptional Mechanisms in the Increase of Its Lysine and Tryptophan Content in Maize |
genes |
3.191 |
2019 |
RNA-Seq |
|
Human cell line |
LFMD: a new likelihood-based method to detect low-frequency mutations without molecular tags |
bioRxiv |
|
2019 |
MtDNA sequencing |
|
Mouse |
YAP Aggravates Inflammatory Bowel Disease by Regulating M1/M2 Macrophage Polarization and Gut Microbial Homeostasis |
Cell Reports |
8.282 |
2019 |
RNA-Seq |
|
Mouse |
Pioneering function of Isl1 in the epigenetic control of cardiomyocyte cell fate |
CELL RESEARCH |
15.393 |
2019 |
RNA-Seq |
|
Zebrafish |
Primary cilia regulate hematopoietic stem and progenitor cell specification through Notch signaling in zebrafish |
Nature Communications |
12.124 |
2019 |
RNA-seq |
|
Human cell line |
Translation of the circular RNA circβ-catenin promotes liver cancer cell growth through activation of the Wnt pathway |
Genome Biology |
13.214 |
2019 |
RNA-seq |
|
Monarch butterfly |
Transcriptomics of monarch butterflies (Danaus plexippus) reveals strong differential gene expression in response to host plant toxicity, but weak response to parasite infection |
bioRxiv |
|
2019 |
RNA-seq |
|
metagenome |
Taxonomic and Functional Characterization of the Microbial Community During Spontaneous in vitro Fermentation of Riesling Must |
Frontiers in Microbiology |
4.076 |
2019 |
metagenome |
|
Soy |
Integration of metabolome and transcriptome analyses highlights soybean roots responding to phosphorus deficiency by modulating phosphorylated metabolite processes |
Plant Physiology and Biochemistry |
2.718 |
2019 |
RNA-seq |
|
Human cell line |
ZBTB24 regulates the apoptosis of human T cells via CDCA7/TRAIL-receptor axis |
Biochemical and Biophysical Research Communications |
2.559 |
2019 |
RNA-seq |
|
yeast |
High production of fatty alcohols in Yarrowia lipolytica by coordination with glycolysis |
Science China Chemistry |
|
2019 |
RNA-seq |
|
Human cell line |
A reference system for BRCA mutation detection based on next-generation sequencing in the Chinese population |
JOURNAL OF MOLECULAR DIAGNOSTICS |
4.88 |
2019 |
capture |
|
pig |
Transcriptomic analysis of small intestinal mucosa from porcine epidemic diarrhea virus infected piglets |
Microbial Pathogenesis |
2.332 |
2019 |
RNA-seq |
|
Human cell line |
Nobiletin exhibits potent inhibition on tumor necrosis factor alpha‐induced calcification of human aortic valve interstitial cells via targeting ABCG2 and AKR1B1 |
Phytotherapy researcch |
3.349 |
2019 |
RNA-seq |
|
Human cell line |
Establishment and characterization of a novel childhood acute lymphoblastic leukemia cell line, HXEX-ALL1, with chromosome 9p and 17p deletions |
Cancer Cell International |
3.96 |
2019 |
WGS |
|
Human cell line |
Nutrient Sensing by the Intestinal Epithelium Orchestrates Mucosal Antimicrobial Defense via Translational Control of Hes1 |
Cell Host & Microbe |
17.872 |
2019 |
RNA-seq |
|
Human cell line |
Genetic Regulation of enoyl-CoA hydratase Domain-Containing 3 in Adipose Tissue Determines Insulin Sensitivity in African Americans and Europeans |
DIABETES |
7.273 |
2019 |
RNA-seq |
|
Mouse |
Dean flow assisted single cell and bead encapsulation for high performance single cell expression profiling |
ACS Sensors |
5.711 |
2019 |
scRNA-Seq |
|
human |
Germline-encoded TCR-MHC contacts promote TCR V gene bias in umbilical cord blood T cell repertoire |
bioRxiv |
|
2019 |
MHC capture |
|
Muhe |
Anticandidal Potential of Stem Bark Extract from Schima superba and the Identification of Its Major Anticandidal Compound |
molecule |
3.098 |
2019 |
RNA-seq |
|
Mouse |
Rescue of Retinal Degeneration in rd1 Mice by Intravitreally Injected Metformin |
frontiers in Molecular Neuroscience |
3.902 |
2019 |
RNA-seq |
|
Pathogen |
Clinical value of whole genome sequencing in severe sepsis and cluster nursing intervention |
Journal of clinical and Pathological Research |
|
2019 |
Pathogen detection |
|
Pathogen |
The application of next-generation sequencing in diagnosing invasive pulmonary aspergillosis:three case reports |
American Journal of Translational Research |
3.061 |
2019 |
Pathogen detection |
|
Bovine herpesvirus 1 |
Cellular microRNA bta-miR-2361 inhibits bovine herpesvirus 1 replication by directly targeting EGR1 gene |
Veterinary Microbiology |
2.524 |
2019 |
Pathogen detection |
|
Zebrafish |
Estrogen accelerates heart regeneration by promoting inflammatory responses in zebrafish |
bioRxiv |
|
2019 |
RNA-seq |
|
human |
Single-cell transcriptomic landscape of nucleated cells in umbilical cord blood |
GigaScience |
7.267 |
2019 |
scRNA-Seq |
|
Mouse |
Short-term High Fructose Intake Reprograms the Transcriptional Clock Rhythm of the Murine Extraorbital |
Investigative Ophthalmology & Visual Science |
3.388 |
2019 |
RNA-seq |
|
Human cell line |
Sequential treatment failures in response to BRAF/MEK and immune checkpoint inhibitors mediated by MAP2K2 and B2M mutations in melanoma |
Experimental and Molecular Pathology |
2.566 |
2019 |
WES |
|
Human cell line |
Cancer‐associated fibroblasts contribute to cisplatin resistance by modulating ANXA3 in lung cancer cells |
cancer science |
4.372 |
2019 |
RNA-seq |
|
human |
Genetic and clinical findings in a large cohort of Chinese patients with suspected retinitis pigmentosa |
AMERICAN JOURNAL OF OPHTHALMOLOGY |
4.795 |
2019 |
WES |
|
human |
Bismuth drugs tackle Porphyromonas gingivalis and attune cytokine response in human cells |
Metallomics |
4.069 |
2019 |
RNA-seq |
|
Mouse |
Ferulic acid altered IL-17A/IL-17RA interaction and protected against imiquimod-induced psoriasis-like skin injury in mice |
Food and Chemical Toxicology |
3.977 |
2019 |
RNA-seq |
|
Mouse |
Alterations in transcriptome and antioxidant activity of naturally aged mice exposed to selenium-rich rice |
ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH |
2.8 |
2019 |
RNA-seq |
|
Mouse |
Integrated Omics Reveals Tollip as an Aggravator and Therapeutic Target for Hepatic Ischemia‐Reperfusion Injury in Mice |
hepatology |
13.246 |
2019 |
RNA-seq |
|
human |
Screening, prenatal diagnosis, and prenatal decision for sex chromosome aneuploidy |
Expert Review of Molecular Diagnostics |
3.326 |
2019 |
NIFTY |
|
human |
Breast milk alkylglycerols sustain beige adipocytes through adipose tissue macrophages |
JOURNAL OF CLINICAL INVESTIGATION |
13.251 |
2019 |
RNA-seq |
|
Zebrafish |
Loss-of-function of sox3 causes follicle development retardation and reduces fecundity in zebrafish |
Protein & Cell |
6.228 |
2019 |
RNA-seq |
|
Rice |
A nucleus-localized PPR protein OsNPPR1 is important for mitochondrial function and endosperm development in rice |
JOURNAL OF EXPERIMENTAL BOTANY |
5.354 |
2019 |
RNA-seq |
|
Echinococcus |
Long-read sequencing reveals a 4.4 kb tandem repeat region in the mitogenome of Echinococcus granulosus (sensu stricto) genotype G1 |
Parasites & Vectors |
3.163 |
2019 |
MtDNA sequencing |
|
Mouse |
Embryoid body-based RNA-seq analyses reveal a potential TBBPA multifaceted developmental toxicity |
Journal of Hazardous Materials |
6.434 |
2019 |
RNA-seq |
|
Human cell line |
Glutaminyl cyclase inhibitor contributes to the regulation of HSP70, HSP90, actin, and ribosome on gene and protein levels in vitro |
JOURNAL OF CELLULAR BIOCHEMISTRY |
2.959 |
2018 |
RNA-seq |
|
|
Next-Generation Sequencing and Emerging Technologies |
SEMINARS IN THROMBOSIS AND HEMOSTASIS |
3.345 |
2019 |
Review |
|
palmatum |
Comparative transcriptome analysis of genes involved in response to thermal stress and leaf colour change of Acer palmatum |
Scientia Horticulturae |
1.624 |
2019 |
RNA-seq |
|
Human cell line |
ZEB1 Represses Neural Differentiation and Cooperates with CTBP2 to Dynamically Regulate Cell Migration during Neocortex Development |
cell reports |
8.282 |
2019 |
RNA-seq |
|
Rat |
Transcriptome profiling of dorsal root ganglia in a rat model of complex regional pain syndrome type-I reveals potential mechanisms involved in pain |
Journal of Pain Research |
2.645 |
2019 |
RNA-seq |
|
crab |
Transcriptomic analysis provides insight into the mechanism of salinity adjustment in swimming crab Portunus trituberculatus |
Genes & Genomics |
0.68 |
2019 |
RNA-seq |
|
virus |
Full genome sequence of a novel potexvirus from Euonymus bungeanus Maxim based on RNA-Seq analysis |
Archives of Virology |
2.16 |
2019 |
RNA-seq |
|
Mouse |
Hepatic Interferon Regulatory Factor 6 Alleviates Liver Steatosis and Metabolic Disorder by Transcriptionally Suppressing Peroxisome Proliferator‐Activated Receptor γ in Mice |
hepatology |
13.246 |
2019 |
RNA-seq |
|
actinobacterium |
Aeromicrobium endophyticum sp. nov., an endophytic actinobacterium isolated from reed (Phragmites australis) |
Journal of Microbiology |
2.319 |
2019 |
WGS |
|
human |
Analysis of Normal Tissues Adjacent to the Tumour-specific expressed genes in Breast Cancer |
Hereditas(Beijing) |
|
2019 |
RNA-seq |
|
E.coli |
Multifaceted Stoichiometry Control of Bacterial Operons Revealed by Deep Proteome Quantification |
frontiers in genetics |
4.151 |
2019 |
RNA-seq |
|
Human cell line |
The E3 ligase VHL promotes follicular helper T cell differentiation via glycolytic-epigenetic control |
JOURNAL OF EXPERIMENTAL MEDICINE |
10.79 |
2019 |
RNA-seq |
|
Arabidopsis thaliana |
mTERF5 Acts as a Transcriptional Pausing Factor to Positively Regulate Transcription of Chloroplast psbEFLJ |
molecular plant |
9.326 |
2019 |
RNA-seq |
|
metagenome |
Altered respiratory virome and serum cytokine profile associated with recurrent respiratory tract infections in children |
Nature Communications |
12.124 |
2019 |
Pathogen detection |
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